CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T1116T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1116T1116TsynacTacC26291262440.99821224908-24910
S1116T1116TsynacTacA26291440.0016735824908-24910
S1116T1116TsynacTacG2629130.00011410724908-24910

Details of the mutation T1116T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1116T1116TacTacC2624426291All0.005019
S1116T1116TacTacA4426291All0.000008
S1116T1116TacTacG326291All0.000001
S1116T1116TacTacC1040210402B.1.2580.692221
S1116T1116TacTacC95949594B.1.258.170.997505
S1116T1116TacTacC24672467B.1.258.110.977804
S1116T1116TacTacC740746B.1.1.70.000662
S1116T1116TacTacA6746B.1.1.70.000005
S1116T1116TacTacC522522B.1.258.70.998088
S1116T1116TacTacC368368B.1.258.220.981333
S1116T1116TacTacC322322B.10.002949
S1116T1116TacTacC289289B.1.258.40.996552
S1116T1116TacTacC200200B.1.258.91
S1116T1116TacTacC141141B.1.258.191
S1116T1116TacTacC127127B.1.258.210.984496
S1116T1116TacTacC125125B.1.258.120.984252
S1116T1116TacTacC114114B.1.258.51
S1116T1116TacTacC8787B.1.258.100.988636
S1116T1116TacTacC5473B.1.1770.000711
S1116T1116TacTacA1973B.1.1770.00025
S1116T1116TacTacC6363B.1.258.201
S1116T1116TacTacC5151B.1.258.61
S1116T1116TacTacC5050B.1.1600.001559
S1116T1116TacTacC4242B.1.258.231
S1116T1116TacTacC3939B.1.10.000707
S1116T1116TacTacC3535Q.10.004421
S1116T1116TacTacC3232B.1.6090.01534
S1116T1116TacTacC3131B.1.258.240.333333
S1116T1116TacTacC2728AY.750.001513
S1116T1116TacTacA128AY.750.000056
S1116T1116TacTacC2525B.1.2340.003299
S1116T1116TacTacC1523AY.1030.000093
S1116T1116TacTacA823AY.1030.00005
S1116T1116TacTacC1818B0.002301
S1116T1116TacTacC1515AY.430.000066
S1116T1116TacTacC1313B.1.1.2220.002652
S1116T1116TacTacC1313B.1.258.140.012745
S1116T1116TacTacC1011B.1.2210.00071
S1116T1116TacTacA111B.1.2210.000071
S1116T1116TacTacC910AY.40.000014
S1116T1116TacTacA110AY.40.000002
S1116T1116TacTacC610AY.440.000037
S1116T1116TacTacA310AY.440.000018
S1116T1116TacTacG110AY.440.000006
S1116T1116TacTacC1010B.1.258.181
S1116T1116TacTacC88B.1.3750.006557
S1116T1116TacTacC77A0.002709
S1116T1116TacTacC67B.1.20.000053
S1116T1116TacTacG17B.1.20.000009
S1116T1116TacTacC77B.1.2220.011844
S1116T1116TacTacC67B.1.617.20.000023
S1116T1116TacTacA17B.1.617.20.000004
S1116T1116TacTacC77B.4.10.132075
S1116T1116TacTacC66B.1.177.860.001101
S1116T1116TacTacC55AY.250.00003
S1116T1116TacTacC55B.1.177.730.002831
S1116T1116TacTacC55B.1.4110.018519
S1116T1116TacTacC55B.1.6000.02924
S1116T1116TacTacC44B.1.1.2160.003562
S1116T1116TacTacC44B.1.1.390.002039
S1116T1116TacTacC44B.1.1260.005102
S1116T1116TacTacC44B.1.177.210.000306
S1116T1116TacTacC44B.1.177.60.003906
S1116T1116TacTacC230.111111
S1116T1116TacTacG130.055556
S1116T1116TacTacC33AY.30.00003
S1116T1116TacTacC33AY.470.000093
S1116T1116TacTacA33B.1.1.3170.001235
S1116T1116TacTacC33B.1.258.150.056604
S1116T1116TacTacC33B.1.3510.000089
S1116T1116TacTacC33B.1.3670.002377
S1116T1116TacTacC33B.1.438.10.000322
S1116T1116TacTacC33P.1.20.003468
S1116T1116TacTacC22AY.200.000078
S1116T1116TacTacC22AY.4.2.10.000298
S1116T1116TacTacC22AY.420.00008
S1116T1116TacTacC22AY.50.000041
S1116T1116TacTacC22B.1.1.1530.002191
S1116T1116TacTacC22B.1.1.3480.001592
S1116T1116TacTacC22B.1.1.5190.000079
S1116T1116TacTacC22B.1.1.700.000682
S1116T1116TacTacC22B.1.1700.008621
S1116T1116TacTacC22B.1.177.440.001038
S1116T1116TacTacC22B.1.5900.009091
S1116T1116TacTacC22B.1.5950.000522
S1116T1116TacTacC22P.10.000032
S1116T1116TacTacC22P.1.60.003891
S1116T1116TacTacC11A.2.50.000499
S1116T1116TacTacC11AT.10.005128
S1116T1116TacTacC11AY.1080.001103
S1116T1116TacTacC11AY.1170.000085
S1116T1116TacTacC11AY.290.000016
S1116T1116TacTacC11AY.3.10.000085
S1116T1116TacTacC11AY.330.000067
S1116T1116TacTacC11AY.360.000148
S1116T1116TacTacC11AY.4.20.000022
S1116T1116TacTacC11AY.46.20.000635
S1116T1116TacTacC11AY.540.000095
S1116T1116TacTacC11AY.610.000105
S1116T1116TacTacC11AY.7.20.000559
S1116T1116TacTacC11AY.75.10.00018
S1116T1116TacTacC11B.1.1.1700.001247
S1116T1116TacTacC11B.1.1.2650.003155
S1116T1116TacTacC11B.1.1.2770.000759
S1116T1116TacTacC11B.1.1.2880.001916
S1116T1116TacTacC11B.1.1.3180.000302
S1116T1116TacTacC11B.1.1.370.000193
S1116T1116TacTacC11B.1.1.3720.000689
S1116T1116TacTacC11B.1.1.3770.001381
S1116T1116TacTacC11B.1.1.3980.003226
S1116T1116TacTacC11B.1.1.4090.002833
S1116T1116TacTacC11B.1.1.470.005348
S1116T1116TacTacC11B.1.1.500.000679
S1116T1116TacTacC11B.1.1570.002985
S1116T1116TacTacC11B.1.177.100.000878
S1116T1116TacTacC11B.1.177.120.000152
S1116T1116TacTacC11B.1.177.70.000165
S1116T1116TacTacC11B.1.177.750.001041
S1116T1116TacTacC11B.1.177.810.000189
S1116T1116TacTacC11B.1.2420.018868
S1116T1116TacTacC11B.1.258.160.001637
S1116T1116TacTacC11B.1.258.30.001675
S1116T1116TacTacC11B.1.2930.0125
S1116T1116TacTacC11B.1.3620.001541
S1116T1116TacTacC11B.1.4060.006061
S1116T1116TacTacC11B.1.4250.002994
S1116T1116TacTacC11B.1.4290.000024
S1116T1116TacTacC11B.1.4320.011236
S1116T1116TacTacC11B.1.4730.019231
S1116T1116TacTacC11B.1.5260.000024
S1116T1116TacTacC11B.1.5760.000907
S1116T1116TacTacC11B.1.5960.000087
S1116T1116TacTacC11B.1.5990.00365
S1116T1116TacTacC11B.1.6300.005236
S1116T1116TacTacC11C.350.000774
S1116T1116TacTacA11P.1.140.000048
S1116T1116TacTacC11Q.80.000165
S1116T1116TacTacC11Z.10.00289