CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = S691S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S691S691SsyntcCtcT984394760.96271523633-23635
S691S691SsyntcCtcG98432920.029665823633-23635
S691S691SsyntcCtcA9843730.0074164423633-23635
S691S691SsynTCcAGc984310.00010159523633-23635
S691S691SsynTCCAGT984310.00010159523633-23635

Details of the mutation S691S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S691S691StcCtcT94769843All0.001812
S691S691StcCtcG2929843All0.000056
S691S691StcCtcA739843All0.000014
S691S691STCcAGc19843All0
S691S691STCCAGT19843All0
S691S691StcCtcT23662616B.1.1.70.002118
S691S691StcCtcG2442616B.1.1.70.000218
S691S691StcCtcA62616B.1.1.70.000005
S691S691StcCtcT10711074AY.440.006519
S691S691StcCtcG21074AY.440.000012
S691S691StcCtcA11074AY.440.000006
S691S691StcCtcT734742AY.40.001142
S691S691StcCtcG4742AY.40.000006
S691S691StcCtcA4742AY.40.000006
S691S691StcCtcT534535AY.250.003212
S691S691StcCtcA1535AY.250.000006
S691S691StcCtcT376386B.1.617.20.001416
S691S691StcCtcG6386B.1.617.20.000023
S691S691StcCtcA4386B.1.617.20.000015
S691S691StcCtcT329330B.1.1.5190.013065
S691S691StcCtcG1330B.1.1.5190.00004
S691S691StcCtcT279279AM.40.996429
S691S691StcCtcT210213B.1.20.001849
S691S691StcCtcA3213B.1.20.000026
S691S691StcCtcT197198AY.470.006128
S691S691StcCtcA1198AY.470.000031
S691S691StcCtcT181185AY.430.000802
S691S691StcCtcG3185AY.430.000013
S691S691StcCtcA1185AY.430.000004
S691S691StcCtcT150156B.10.001374
S691S691StcCtcA4156B.10.000037
S691S691StcCtcG2156B.10.000018
S691S691StcCtcT139151B.1.3510.004132
S691S691StcCtcG12151B.1.3510.000357
S691S691StcCtcT136136B.1.5640.057922
S691S691StcCtcT132135AY.1030.00082
S691S691StcCtcG2135AY.1030.000012
S691S691StcCtcA1135AY.1030.000006
S691S691StcCtcT117117AY.980.009242
S691S691StcCtcT97103B.1.10.00176
S691S691StcCtcA4103B.1.10.000073
S691S691STCCAGT1103B.1.10.000018
S691S691STCcAGc1103B.1.10.000018
S691S691StcCtcT8788AY.1020.002307
S691S691StcCtcA188AY.1020.000027
S691S691StcCtcT8788AY.30.000865
S691S691StcCtcA188AY.30.00001
S691S691StcCtcT8488B.1.177.810.015903
S691S691StcCtcA488B.1.177.810.000757
S691S691StcCtcT8485B.1.1770.001106
S691S691StcCtcA185B.1.1770.000013
S691S691StcCtcT8282B.1.1591
S691S691StcCtcT7979P.10.001245
S691S691StcCtcT7273B.1.1.2220.014688
S691S691StcCtcG173B.1.1.2220.000204
S691S691StcCtcT6162D.20.004578
S691S691StcCtcG162D.20.000075
S691S691StcCtcT5656AY.230.003906
S691S691StcCtcT5254B.1.2430.003618
S691S691StcCtcA254B.1.2430.000139
S691S691StcCtcT5252AY.46.40.008554
S691S691StcCtcT5052B.1.4290.001176
S691S691StcCtcG252B.1.4290.000047
S691S691StcCtcT4949B.1.4270.002474
S691S691StcCtcT4444P.1.150.010223
S691S691StcCtcT4242B.1.2340.005542
S691S691StcCtcT4040AY.1000.00184
S691S691StcCtcT3939AY.160.014806
S691S691StcCtcT3434AY.200.001321
S691S691StcCtcT3434B.1.6190.029617
S691S691StcCtcT3030AM.31
S691S691StcCtcT3030AY.4.20.000651
S691S691StcCtcT2929B.1.1.4280.273585
S691S691StcCtcT2828B.1.5260.000658
S691S691StcCtcT2626B.1.177.350.017968
S691S691StcCtcT2626B.1.177.420.023256
S691S691StcCtcT2425AY.50.000496
S691S691StcCtcA125AY.50.000021
S691S691StcCtcT2323B.1.6180.092742
S691S691StcCtcT2222AY.260.000623
S691S691StcCtcT2122AY.390.000519
S691S691StcCtcA122AY.390.000025
S691S691StcCtcT2121B.1.2580.001397
S691S691StcCtcT2121P.1.120.010165
S691S691StcCtcT1820AY.290.000284
S691S691StcCtcA220AY.290.000032
S691S691StcCtcT2020B.1.177.40.004221
S691S691StcCtcT2020B.1.2210.001421
S691S691StcCtcT1919B.1.6370.001388
S691S691StcCtcT1818AY.450.00219
S691S691StcCtcT1818B.1.177.150.011356
S691S691StcCtcT1517AY.1210.00203
S691S691StcCtcG217AY.1210.000271
S691S691StcCtcT1617B.1.1600.000499
S691S691StcCtcA117B.1.1600.000031
S691S691StcCtcT1717B.1.3110.004668
S691S691StcCtcT1414AY.1190.000494
S691S691StcCtcT1214AY.3.10.001023
S691S691StcCtcA214AY.3.10.000171
S691S691StcCtcT1414AY.5.40.003874
S691S691StcCtcA914AY.60.00037
S691S691StcCtcT514AY.60.000206
S691S691StcCtcT1414B.1.2400.003018
S691S691StcCtcT1313AY.1200.000483
S691S691StcCtcT1213B.1.1.2160.010686
S691S691StcCtcG113B.1.1.2160.00089
S691S691StcCtcT1313B.1.2100.027719
S691S691StcCtcT1212AY.540.001144
S691S691StcCtcT1212B.1.5610.004764
S691S691StcCtcT1212P.1.170.001941
S691S691StcCtcT1111AY.46.60.000794
S691S691StcCtcT1111B.1.1.250.006254
S691S691StcCtcT1111C.160.011665
S691S691StcCtcT1010AY.370.003161
S691S691StcCtcA910B.1.1.3260.015845
S691S691StcCtcT110B.1.1.3260.001761
S691S691StcCtcT1010B.1.177.860.001835
S691S691StcCtcT910B.1.360.001313
S691S691StcCtcA110B.1.360.000146
S691S691StcCtcT1010B.1.5650.008104
S691S691StcCtcT1010P.1.100.002695
S691S691StcCtcT1010P.1.140.000478
S691S691StcCtcT1010P.1.160.003741
S691S691StcCtcT99AY.1170.000761
S691S691StcCtcT79AY.120.002212
S691S691StcCtcG29AY.120.000632
S691S691StcCtcT89AY.690.001493
S691S691StcCtcA19AY.690.000187
S691S691StcCtcT99AY.99.20.000829
S691S691StcCtcT99B.1.110.30.006466
S691S691StcCtcT99B.1.5960.000784
S691S691StcCtcT99C.36.30.005105
S691S691StcCtcT99C.370.001045
S691S691StcCtcT88AY.1130.001139
S691S691StcCtcT78AY.420.000282
S691S691StcCtcA18AY.420.00004
S691S691StcCtcT88AY.9.10.00067
S691S691StcCtcT88AY.9.20.000294
S691S691StcCtcT88B.1.1.1710.029412
S691S691StcCtcT88B.1.177.270.075472
S691S691StcCtcT88P.20.001493
S691S691StcCtcT88R.10.00072
S691S691StcCtcT77AY.1160.002007
S691S691StcCtcT77AY.610.000733
S691S691StcCtcT67B.1.6210.000531
S691S691StcCtcA17B.1.6210.000089
S691S691StcCtcT66AY.1180.000376
S691S691StcCtcT66AY.340.000582
S691S691StcCtcT66AY.4.50.000645
S691S691StcCtcT66AY.710.00285
S691S691StcCtcT66AY.770.006764
S691S691StcCtcT66B.1.1.2140.000333
S691S691StcCtcT46B.1.1.280.001245
S691S691StcCtcG26B.1.1.280.000622
S691S691StcCtcT66B.1.499.10.666667
S691S691StcCtcT66N.50.010601
S691S691StcCtcT55AY.1100.000563
S691S691StcCtcT55AY.240.002155
S691S691StcCtcT55AY.330.000334
S691S691StcCtcT55AY.360.000741
S691S691StcCtcT55AY.460.00052
S691S691StcCtcT55AY.740.000578
S691S691StcCtcT55AY.75.10.000902
S691S691StcCtcT55B.1.1.3060.002192
S691S691StcCtcT55B.1.1.4030.128205
S691S691StcCtcT55B.1.1.700.001705
S691S691StcCtcT55B.1.177.820.002387
S691S691StcCtcT55B.1.466.20.001956
S691S691StcCtcT44AY.10.001583
S691S691StcCtcT44AY.140.000352
S691S691StcCtcT44AY.350.000932
S691S691StcCtcT44AY.380.001997
S691S691StcCtcT44AY.4.30.003367
S691S691StcCtcT44AY.510.003636
S691S691StcCtcT44AY.750.000224
S691S691StcCtcT34AY.910.002191
S691S691StcCtcG14AY.910.00073
S691S691StcCtcT44AY.920.001149
S691S691StcCtcT44AY.98.10.000194
S691S691StcCtcT44B.1.1.1590.018692
S691S691StcCtcT44B.1.1.2850.026144
S691S691StcCtcT44B.1.1.3540.017544
S691S691StcCtcT44B.1.177.600.000874
S691S691StcCtcT44B.1.351.20.00121
S691S691StcCtcT44B.1.36.380.006568
S691S691StcCtcT44B.1.3960.002823
S691S691StcCtcT44B.1.4050.049383
S691S691StcCtcT44B.1.438.10.000429
S691S691StcCtcT44B.1.5230.009804
S691S691StcCtcT44B.1.5820.001963
S691S691StcCtcA24C.360.001821
S691S691StcCtcT24C.360.001821
S691S691StcCtcT33A0.001161
S691S691StcCtcT33A.2.50.001497
S691S691StcCtcT33AY.1140.000693
S691S691StcCtcT33AY.39.10.000119
S691S691StcCtcT33AY.46.20.001906
S691S691StcCtcT33AY.90.000203
S691S691StcCtcT33AY.99.10.004658
S691S691StcCtcT33B.1.1.2630.004673
S691S691StcCtcT33B.1.1.2980.002586
S691S691StcCtcT33B.1.1.5210.016043
S691S691StcCtcT33B.1.1.630.001157
S691S691StcCtcT33B.1.177.800.005736
S691S691StcCtcT33B.1.2060.002447
S691S691StcCtcT23B.1.2410.001623
S691S691StcCtcA13B.1.2410.000812
S691S691StcCtcT33B.1.258.170.000312
S691S691StcCtcT33B.1.351.30.002629
S691S691StcCtcT33B.1.5410.013274
S691S691StcCtcT23B.1.5680.002222
S691S691StcCtcG13B.1.5680.001111
S691S691StcCtcT33B.1.5740.006452
S691S691StcCtcT33B.1.5750.00091
S691S691StcCtcT33B.1.5950.000783
S691S691StcCtcT33B.1.617.10.000387
S691S691StcCtcT33B.1.6200.002838
S691S691StcCtcT33P.1.70.000958
S691S691StcCtcT33Q.10.000379
S691S691StcCtcT22AU.10.002532
S691S691StcCtcT22AU.30.004219
S691S691StcCtcT22AY.116.10.000623
S691S691StcCtcT22AY.4.2.10.000298
S691S691StcCtcA12AY.550.000917
S691S691StcCtcT12AY.550.000917
S691S691StcCtcT22AY.620.000871
S691S691StcCtcT22AY.630.000774
S691S691StcCtcT22AY.7.20.001119
S691S691StcCtcT22AY.850.000854
S691S691StcCtcT22AY.990.002099
S691S691StcCtcT22B0.000256
S691S691StcCtcT22B.1.1.1530.002191
S691S691StcCtcT22B.1.1.2940.002532
S691S691StcCtcT22B.1.1.3160.00185
S691S691StcCtcT22B.1.1.330.000842
S691S691StcCtcT22B.1.1.390.001019
S691S691StcCtcT22B.1.1.3970.004505
S691S691StcCtcT22B.1.1.4320.002532
S691S691StcCtcT22B.1.1.540.006042
S691S691StcCtcT22B.1.1110.00235
S691S691StcCtcT22B.1.177.310.022989
S691S691StcCtcT22B.1.177.730.001133
S691S691StcCtcT22B.1.1870.066667
S691S691StcCtcT22B.1.258.110.000793
S691S691StcCtcT22B.1.3060.011429
S691S691StcCtcT22B.1.3340.036364
S691S691StcCtcT22B.1.3690.00057
S691S691StcCtcT22B.1.4250.005988
S691S691StcCtcT22B.1.5170.000854
S691S691StcCtcT22B.1.5250.000226
S691S691StcCtcT22B.1.5270.007407
S691S691StcCtcT22B.1.5480.071429
S691S691StcCtcT22B.1.5600.009259
S691S691StcCtcT22B.400.000729
S691S691StcCtcT22N.90.011905
S691S691StcCtcT22P.1.40.001953
S691S691StcCtcT22P.30.00319
S691S691StcCtcT22Q.40.00091
S691S691StcCtcT11A.10.000282
S691S691StcCtcT11A.20.000662
S691S691StcCtcT11A.210.00277
S691S691StcCtcT11AY.100.00053
S691S691StcCtcT11AY.1010.00049
S691S691StcCtcT11AY.1060.000335
S691S691StcCtcT11AY.1070.000466
S691S691StcCtcT11AY.1080.001103
S691S691StcCtcT11AY.23.10.000417
S691S691StcCtcT11AY.270.000065
S691S691StcCtcT11AY.29.10.000221
S691S691StcCtcT11AY.320.000532
S691S691StcCtcT11AY.34.10.00051
S691S691StcCtcT11AY.46.50.000198
S691S691StcCtcT11AY.490.003195
S691S691StcCtcT11AY.500.000799
S691S691StcCtcT11AY.530.000288
S691S691StcCtcT11AY.590.00053
S691S691StcCtcT11AY.680.000274
S691S691StcCtcT11AY.700.000209
S691S691StcCtcT11AY.720.001361
S691S691StcCtcT11AY.730.000665
S691S691StcCtcT11AY.780.001541
S691S691StcCtcT11AY.790.001211
S691S691StcCtcT11AY.820.001357
S691S691StcCtcT11AY.950.000761
S691S691StcCtcT11B.1.1.1480.008772
S691S691StcCtcT11B.1.1.1690.018182
S691S691StcCtcT11B.1.1.2070.001182
S691S691StcCtcT11B.1.1.2690.001353
S691S691StcCtcT11B.1.1.2970.002237
S691S691StcCtcT11B.1.1.2990.012195
S691S691StcCtcT11B.1.1.3070.002532
S691S691StcCtcT11B.1.1.3170.000412
S691S691StcCtcT11B.1.1.3180.000302
S691S691StcCtcT11B.1.1.3370.003597
S691S691StcCtcT11B.1.1.3430.020833
S691S691StcCtcT11B.1.1.3680.003086
S691S691StcCtcT11B.1.1.3730.02381
S691S691StcCtcT11B.1.1.4090.002833
S691S691StcCtcT11B.1.1.4370.010417
S691S691StcCtcT11B.1.1.460.004367
S691S691StcCtcT11B.1.1.4640.001473
S691S691StcCtcT11B.1.1.4860.001577
S691S691StcCtcT11B.1.1.580.005376
S691S691StcCtcT11B.1.1280.000635
S691S691StcCtcT11B.1.160.230.004831
S691S691StcCtcT11B.1.160.250.011111
S691S691StcCtcA11B.1.160.320.004292
S691S691StcCtcT11B.1.177.100.000878
S691S691StcCtcT11B.1.177.160.000664
S691S691StcCtcT11B.1.177.230.003236
S691S691StcCtcT11B.1.177.320.00135
S691S691StcCtcT11B.1.177.440.000519
S691S691StcCtcT11B.1.177.450.000381
S691S691StcCtcT11B.1.177.500.004695
S691S691StcCtcT11B.1.177.550.002331
S691S691StcCtcT11B.1.177.770.000726
S691S691StcCtcT11B.1.1790.003759
S691S691StcCtcT11B.1.214.20.0006
S691S691StcCtcT11B.1.221.10.002907
S691S691StcCtcT11B.1.2290.009709
S691S691StcCtcT11B.1.2390.001221
S691S691StcCtcT11B.1.258.140.00098
S691S691StcCtcT11B.1.258.220.002667
S691S691StcCtcT11B.1.258.30.001675
S691S691StcCtcT11B.1.258.50.008772
S691S691StcCtcT11B.1.3200.001245
S691S691StcCtcT11B.1.3240.001605
S691S691StcCtcT11B.1.3380.008621
S691S691StcCtcT11B.1.36.10.00114
S691S691StcCtcT11B.1.36.180.00042
S691S691StcCtcT11B.1.36.220.001208
S691S691StcCtcT11B.1.36.290.000517
S691S691StcCtcT11B.1.36.360.000602
S691S691StcCtcT11B.1.36.390.002217
S691S691StcCtcT11B.1.3980.002976
S691S691StcCtcT11B.1.4280.00102
S691S691StcCtcT11B.1.4680.005714
S691S691StcCtcT11B.1.4700.001404
S691S691StcCtcT11B.1.5090.000866
S691S691StcCtcT11B.1.5210.004975
S691S691StcCtcT11B.1.5360.02381
S691S691StcCtcT11B.1.5400.009709
S691S691StcCtcT11B.1.5580.004566
S691S691StcCtcT11B.1.564.10.001577
S691S691StcCtcT11B.1.5760.000907
S691S691StcCtcT11B.1.5770.000687
S691S691StcCtcT11B.1.5880.00091
S691S691StcCtcT11B.1.6120.002653
S691S691StcCtcT11B.1.619.10.000641
S691S691StcCtcG11B.1.6220.012987
S691S691StcCtcT11B.1.6230.000536
S691S691StcCtcT11B.1.6250.002353
S691S691StcCtcT11B.290.003509
S691S691StcCtcT11B.300.014706
S691S691StcCtcT11B.310.003731
S691S691StcCtcT11B.60.00091
S691S691StcCtcT11C.1.20.004255
S691S691StcCtcG11C.100.25
S691S691StcCtcT11C.170.055556
S691S691StcCtcT11C.230.005814
S691S691StcCtcT11C.350.000774
S691S691StcCtcT11N.60.007092
S691S691StcCtcT11P.1.10.000318
S691S691StcCtcG11P.1.110.010204
S691S691StcCtcT11P.1.90.004808
S691S691StcCtcT11P.40.003802
S691S691StcCtcT11Q.30.000145