CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = S221S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S221S221SsyntcGtcT11997101170.84329422223-22225
S221S221SsyntcGtcA1199712940.1078622223-22225
S221S221SsyntcGtcC119975860.048845522223-22225

Details of the mutation S221S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S221S221StcGtcT1011711997All0.001935
S221S221StcGtcA129411997All0.000247
S221S221StcGtcC58611997All0.000112
S221S221StcGtcT19282168B.1.1.70.001726
S221S221StcGtcA2302168B.1.1.70.000206
S221S221StcGtcC102168B.1.1.70.000009
S221S221StcGtcT12871362AY.40.002003
S221S221StcGtcA621362AY.40.000096
S221S221StcGtcC131362AY.40.00002
S221S221StcGtcT750811B.1.617.20.002824
S221S221StcGtcA41811B.1.617.20.000154
S221S221StcGtcC20811B.1.617.20.000075
S221S221StcGtcT530530B.1.4270.026764
S221S221StcGtcT391458AY.440.00238
S221S221StcGtcA65458AY.440.000396
S221S221StcGtcC2458AY.440.000012
S221S221StcGtcT412456AY.430.001825
S221S221StcGtcC25456AY.430.000111
S221S221StcGtcA19456AY.430.000084
S221S221StcGtcT384423AY.260.010871
S221S221StcGtcA39423AY.260.001104
S221S221StcGtcT362366AY.50.007475
S221S221StcGtcC2366AY.50.000041
S221S221StcGtcA2366AY.50.000041
S221S221StcGtcT348363B.1.20.003064
S221S221StcGtcA15363B.1.20.000132
S221S221StcGtcC299315AY.470.0093
S221S221StcGtcT14315AY.470.000435
S221S221StcGtcA2315AY.470.000062
S221S221StcGtcT197240B.10.001804
S221S221StcGtcA41240B.10.000376
S221S221StcGtcC2240B.10.000018
S221S221StcGtcT203203B.1.3660.990244
S221S221StcGtcA179194B.1.438.10.0192
S221S221StcGtcT15194B.1.438.10.001609
S221S221StcGtcT158158B.1.214.20.094724
S221S221StcGtcT99153AY.1030.000615
S221S221StcGtcA47153AY.1030.000292
S221S221StcGtcC7153AY.1030.000043
S221S221StcGtcT118139AY.250.00071
S221S221StcGtcA17139AY.250.000102
S221S221StcGtcC4139AY.250.000024
S221S221StcGtcT117129AY.1020.003102
S221S221StcGtcA12129AY.1020.000318
S221S221StcGtcT88123P.10.001386
S221S221StcGtcA25123P.10.000394
S221S221StcGtcC10123P.10.000158
S221S221StcGtcC90105AY.60.003702
S221S221StcGtcT14105AY.60.000576
S221S221StcGtcA1105AY.60.000041
S221S221StcGtcT94103AY.610.009849
S221S221StcGtcA8103AY.610.000838
S221S221StcGtcC1103AY.610.000105
S221S221StcGtcT65103B.1.1770.000856
S221S221StcGtcA35103B.1.1770.000461
S221S221StcGtcC3103B.1.1770.00004
S221S221StcGtcT8794B.1.10.001578
S221S221StcGtcA794B.1.10.000127
S221S221StcGtcT9194B.1.1600.002838
S221S221StcGtcA394B.1.1600.000094
S221S221StcGtcT8991AY.390.002199
S221S221StcGtcA291AY.390.000049
S221S221StcGtcT7983AY.1190.002789
S221S221StcGtcA483AY.1190.000141
S221S221StcGtcT5981AY.30.000587
S221S221StcGtcA2181AY.30.000209
S221S221StcGtcC181AY.30.00001
S221S221StcGtcT7777B.1.3200.09589
S221S221StcGtcT7172B.1.1.700.024216
S221S221StcGtcA172B.1.1.700.000341
S221S221StcGtcT5466B.1.5260.001269
S221S221StcGtcA1266B.1.5260.000282
S221S221StcGtcT6060B.1.1.3120.114723
S221S221StcGtcT4560B.1.2580.002995
S221S221StcGtcA1560B.1.2580.000998
S221S221StcGtcT5959AY.4.50.006342
S221S221StcGtcT5657AY.980.004424
S221S221StcGtcA157AY.980.000079
S221S221StcGtcA4956AY.760.236715
S221S221StcGtcT756AY.760.033816
S221S221StcGtcT5252B.1.415.10.393939
S221S221StcGtcT4346B.1.4290.001012
S221S221StcGtcA346B.1.4290.000071
S221S221StcGtcA2346B.1.5960.002004
S221S221StcGtcT2246B.1.5960.001917
S221S221StcGtcC146B.1.5960.000087
S221S221StcGtcT3642AY.200.001399
S221S221StcGtcA442AY.200.000155
S221S221StcGtcC242AY.200.000078
S221S221StcGtcT3341AY.330.002204
S221S221StcGtcC641AY.330.000401
S221S221StcGtcA241AY.330.000134
S221S221StcGtcT3440B.1.360.004961
S221S221StcGtcA640B.1.360.000875
S221S221StcGtcT3839AY.160.014427
S221S221StcGtcA139AY.160.00038
S221S221StcGtcT3839AY.99.20.003502
S221S221StcGtcA139AY.99.20.000092
S221S221StcGtcT2437AY.420.000966
S221S221StcGtcA1337AY.420.000523
S221S221StcGtcA3637B.1.36.360.021674
S221S221StcGtcT137B.1.36.360.000602
S221S221StcGtcT3636R.10.00324
S221S221StcGtcA2835B.1.5250.003168
S221S221StcGtcT735B.1.5250.000792
S221S221StcGtcC2031AY.230.001395
S221S221StcGtcT831AY.230.000558
S221S221StcGtcA331AY.230.000209
S221S221StcGtcT1831AY.4.20.00039
S221S221StcGtcC931AY.4.20.000195
S221S221StcGtcA431AY.4.20.000087
S221S221StcGtcT3030AY.1180.001879
S221S221StcGtcT2030AY.90.001352
S221S221StcGtcA1030AY.90.000676
S221S221StcGtcT2230B.1.1.5190.000874
S221S221StcGtcA830B.1.1.5190.000318
S221S221StcGtcT2729AY.1200.001004
S221S221StcGtcC129AY.1200.000037
S221S221StcGtcA129AY.1200.000037
S221S221StcGtcT2029B.1.3510.000595
S221S221StcGtcA929B.1.3510.000268
S221S221StcGtcT2626B.1.1.3720.017906
S221S221StcGtcT2126B.1.2430.001461
S221S221StcGtcA526B.1.2430.000348
S221S221StcGtcT1925B.1.177.210.001453
S221S221StcGtcA625B.1.177.210.000459
S221S221StcGtcT2425B.1.36.290.012416
S221S221StcGtcA125B.1.36.290.000517
S221S221StcGtcT2324AY.130.003703
S221S221StcGtcA124AY.130.000161
S221S221StcGtcT2124C.370.002437
S221S221StcGtcA324C.370.000348
S221S221StcGtcT2123B.1.2210.001492
S221S221StcGtcA223B.1.2210.000142
S221S221StcGtcT2023B.1.6210.00177
S221S221StcGtcC323B.1.6210.000266
S221S221StcGtcT1621AY.290.000252
S221S221StcGtcA521AY.290.000079
S221S221StcGtcT1421AY.98.10.000678
S221S221StcGtcA621AY.98.10.000291
S221S221StcGtcC121AY.98.10.000048
S221S221StcGtcT1919AY.820.02578
S221S221StcGtcT1919AY.9.20.000698
S221S221StcGtcC1219B.1.1.280.003735
S221S221StcGtcT719B.1.1.280.002179
S221S221StcGtcT1518AY.1000.00069
S221S221StcGtcA318AY.1000.000138
S221S221StcGtcA1118P.20.002053
S221S221StcGtcT718P.20.001306
S221S221StcGtcT1617AY.540.001526
S221S221StcGtcA117AY.540.000095
S221S221StcGtcT1417B.1.177.600.003058
S221S221StcGtcA317B.1.177.600.000655
S221S221StcGtcT1717B.1.258.110.006738
S221S221StcGtcT1616P.1.100.004312
S221S221StcGtcA1315B.1.1.3480.01035
S221S221StcGtcT215B.1.1.3480.001592
S221S221StcGtcT1415P.1.140.000669
S221S221StcGtcA115P.1.140.000048
S221S221StcGtcT1214AY.39.10.000475
S221S221StcGtcA214AY.39.10.000079
S221S221StcGtcT1414AY.75.10.002524
S221S221StcGtcT1414B.1.1.2170.050909
S221S221StcGtcT1214B.1.1.330.005051
S221S221StcGtcC214B.1.1.330.000842
S221S221StcGtcT1414B.1.1.630.005401
S221S221StcGtcT1414B.1.177.170.011494
S221S221StcGtcT1414B.1.177.810.002651
S221S221StcGtcA1414B.1.258.170.001456
S221S221StcGtcT1414B.1.3690.003993
S221S221StcGtcT1414B.1.4690.050542
S221S221StcGtcT1414B.1.596.10.130841
S221S221StcGtcT1213AY.1170.001014
S221S221StcGtcA113AY.1170.000085
S221S221StcGtcT1113AY.450.001339
S221S221StcGtcA213AY.450.000243
S221S221StcGtcT813AY.460.000833
S221S221StcGtcC413AY.460.000416
S221S221StcGtcA113AY.460.000104
S221S221StcGtcT1112AY.1210.001488
S221S221StcGtcA112AY.1210.000135
S221S221StcGtcT712B.1.3110.001922
S221S221StcGtcA512B.1.3110.001373
S221S221StcGtcT1011AY.340.00097
S221S221StcGtcC111AY.340.000097
S221S221StcGtcT911AY.590.004767
S221S221StcGtcA211AY.590.001059
S221S221StcGtcT1111B.1.351.20.003328
S221S221StcGtcT1111B.1.6370.000804
S221S221StcGtcA1111P.1.20.012717
S221S221StcGtcT1010AY.46.60.000722
S221S221StcGtcT910B.1.1.2220.001836
S221S221StcGtcA110B.1.1.2220.000204
S221S221StcGtcT1010B.1.177.750.010406
S221S221StcGtcT910B.1.617.10.001161
S221S221StcGtcA110B.1.617.10.000129
S221S221StcGtcT810Q.80.001319
S221S221StcGtcA210Q.80.00033
S221S221StcGtcA59AY.4.2.10.000745
S221S221StcGtcT49AY.4.2.10.000596
S221S221StcGtcT79AY.9.10.000586
S221S221StcGtcA29AY.9.10.000167
S221S221StcGtcT99B.1.1.2630.014019
S221S221StcGtcT99B.1.1.3060.003946
S221S221StcGtcT99B.1.1.3740.021378
S221S221StcGtcT99B.1.160.140.019068
S221S221StcGtcT89B.1.2400.001725
S221S221StcGtcC19B.1.2400.000216
S221S221StcGtcT99C.36.10.037344
S221S221StcGtcT88AY.120.10.002568
S221S221StcGtcC88AY.620.003486
S221S221StcGtcT78B0.000895
S221S221StcGtcA18B0.000128
S221S221StcGtcT88B.1.1.4160.00724
S221S221StcGtcT88B.1.416.10.0125
S221S221StcGtcT67AY.1130.000854
S221S221StcGtcA17AY.1130.000142
S221S221StcGtcT67AY.3.10.000512
S221S221StcGtcA17AY.3.10.000085
S221S221StcGtcT77AY.4.40.002864
S221S221StcGtcT67B.1.1.370.001157
S221S221StcGtcC17B.1.1.370.000193
S221S221StcGtcT77B.1.1.4850.116667
S221S221StcGtcT77B.1.177.800.013384
S221S221StcGtcT77B.1.3620.010786
S221S221StcGtcT77C.36.30.003971
S221S221StcGtcT46AY.140.000352
S221S221StcGtcC16AY.140.000088
S221S221StcGtcA16AY.140.000088
S221S221StcGtcT66AY.270.000388
S221S221StcGtcT66AY.360.000889
S221S221StcGtcT36AY.750.000168
S221S221StcGtcC36AY.750.000168
S221S221StcGtcT66B.1.2320.003224
S221S221StcGtcT66B.1.3240.009631
S221S221StcGtcT66B.1.351.30.005259
S221S221StcGtcA66C.260.044118
S221S221StcGtcT55AY.120.00158
S221S221StcGtcT45AY.46.40.000658
S221S221StcGtcA15AY.46.40.000165
S221S221StcGtcT35AY.690.00056
S221S221StcGtcA25AY.690.000373
S221S221StcGtcT55B.1.1.2410.010352
S221S221StcGtcT55B.1.1.3180.001509
S221S221StcGtcT55B.1.1.470.026738
S221S221StcGtcT55B.1.1110.005875
S221S221StcGtcA55B.1.258.30.008375
S221S221StcGtcT45P.1.150.000929
S221S221StcGtcA15P.1.150.000232
S221S221StcGtcT45P.70.017467
S221S221StcGtcA15P.70.004367
S221S221StcGtcT44AY.190.004561
S221S221StcGtcT44AY.20.001425
S221S221StcGtcT44AY.5.30.00135
S221S221StcGtcT44AY.740.000463
S221S221StcGtcT44AY.840.00175
S221S221StcGtcT44B.1.1.1700.004988
S221S221StcGtcT44B.1.1.2160.003562
S221S221StcGtcT44B.1.1.2310.012384
S221S221StcGtcT44B.1.1.2660.04878
S221S221StcGtcT24B.1.177.540.001213
S221S221StcGtcC24B.1.177.540.001213
S221S221StcGtcT44B.1.2030.25
S221S221StcGtcA44B.1.221.20.016064
S221S221StcGtcT44B.1.2340.000528
S221S221StcGtcT44B.1.36.190.037037
S221S221StcGtcT44B.1.3980.011905
S221S221StcGtcT44B.1.4060.024242
S221S221StcGtcC34B.1.5170.001281
S221S221StcGtcA14B.1.5170.000427
S221S221StcGtcT44B.1.5650.003241
S221S221StcGtcT44B.1.5750.001214
S221S221StcGtcT44C.10.009569
S221S221StcGtcA44Q.30.00058
S221S221StcGtcT23A.23.10.001408
S221S221StcGtcA13A.23.10.000704
S221S221StcGtcT33AD.20.000657
S221S221StcGtcT33AY.10.001187
S221S221StcGtcT23AY.1060.00067
S221S221StcGtcA13AY.1060.000335
S221S221StcGtcT33AY.23.10.001252
S221S221StcGtcA33AY.280.005671
S221S221StcGtcT33AY.380.001498
S221S221StcGtcT33AY.4.30.002525
S221S221StcGtcT33AY.480.001395
S221S221StcGtcT33AY.530.000863
S221S221StcGtcT33AY.550.002752
S221S221StcGtcT33AY.670.001393
S221S221StcGtcT33AY.680.000821
S221S221StcGtcT33AY.700.000626
S221S221StcGtcT33AY.710.001425
S221S221StcGtcT33AY.730.001996
S221S221StcGtcT23AY.850.000854
S221S221StcGtcC13AY.850.000427
S221S221StcGtcA33AY.91.10.012195
S221S221StcGtcT33AY.920.000862
S221S221StcGtcT33B.1.1.10.00098
S221S221StcGtcT33B.1.1.2140.000166
S221S221StcGtcT33B.1.1.3220.026316
S221S221StcGtcT33B.1.1.3970.006757
S221S221StcGtcT33B.1.177.100.002634
S221S221StcGtcA33B.1.177.70.000495
S221S221StcGtcT33B.1.177.860.00055
S221S221StcGtcT33B.1.214.30.021429
S221S221StcGtcA33B.1.2330.042254
S221S221StcGtcT33B.1.2390.003663
S221S221StcGtcT33B.1.351.50.001799
S221S221StcGtcT33B.1.3960.002117
S221S221StcGtcT23B.1.4590.008163
S221S221StcGtcC13B.1.4590.004082
S221S221StcGtcT33B.1.466.20.001174
S221S221StcGtcT33B.1.5770.002062
S221S221StcGtcT33B.1.5880.00273
S221S221StcGtcT33B.1.6310.010101
S221S221StcGtcT33B.310.011194
S221S221StcGtcT33C.360.002732
S221S221StcGtcT33P.1.10.000953
S221S221StcGtcT33P.1.120.001452
S221S221StcGtcT23P.1.170.000324
S221S221StcGtcA13P.1.170.000162
S221S221StcGtcT22A0.000774
S221S221StcGtcT22A.10.000564
S221S221StcGtcT22A.20.001324
S221S221StcGtcT22A.2.50.000998
S221S221StcGtcA22A.280.005291
S221S221StcGtcA12AY.29.10.000221
S221S221StcGtcT12AY.29.10.000221
S221S221StcGtcT22AY.400.001929
S221S221StcGtcT12AY.70.000196
S221S221StcGtcA12AY.70.000196
S221S221StcGtcT22AY.7.10.000225
S221S221StcGtcT22AY.790.002421
S221S221StcGtcT12AY.880.000884
S221S221StcGtcA12AY.880.000884
S221S221StcGtcA22AY.940.000885
S221S221StcGtcT22AY.950.001522
S221S221StcGtcT22B.1.1.1290.018349
S221S221StcGtcT22B.1.1.1380.012121
S221S221StcGtcT22B.1.1.2070.002364
S221S221StcGtcT12B.1.1.2200.001859
S221S221StcGtcC12B.1.1.2200.001859
S221S221StcGtcT22B.1.1.2400.00939
S221S221StcGtcT22B.1.1.2840.000215
S221S221StcGtcT22B.1.1.2890.004167
S221S221StcGtcC22B.1.1.2910.001485
S221S221StcGtcT22B.1.1.3010.002358
S221S221StcGtcT22B.1.1.3050.007722
S221S221StcGtcT22B.1.1.3190.035088
S221S221StcGtcT22B.1.1.3260.003521
S221S221StcGtcT12B.1.1.3980.003226
S221S221StcGtcA12B.1.1.3980.003226
S221S221StcGtcC22B.1.1.500.001358
S221S221StcGtcT22B.1.1.930.051282
S221S221StcGtcT22B.1.177.90.002663
S221S221StcGtcT22B.1.2060.001631
S221S221StcGtcT22B.1.2410.001623
S221S221StcGtcT22B.1.3320.006993
S221S221StcGtcT22B.1.3420.2
S221S221StcGtcT22B.1.36.10.002281
S221S221StcGtcT22B.1.36.170.000988
S221S221StcGtcT22B.1.3750.001639
S221S221StcGtcT12B.1.4000.000429
S221S221StcGtcA12B.1.4000.000429
S221S221StcGtcA22B.1.4040.002604
S221S221StcGtcT22B.1.4930.051282
S221S221StcGtcT12B.1.910.002075
S221S221StcGtcC12B.1.910.002075
S221S221StcGtcT22B.400.000729
S221S221StcGtcT22B.6.60.001778
S221S221StcGtcT12Q.10.000126
S221S221StcGtcA12Q.10.000126
S221S221StcGtcT11A.2.40.003367
S221S221StcGtcA11A.210.00277
S221S221StcGtcA11AY.100.00053
S221S221StcGtcT11AY.1010.00049
S221S221StcGtcT11AY.1090.00074
S221S221StcGtcT11AY.1110.000183
S221S221StcGtcT11AY.1150.005208
S221S221StcGtcT11AY.1160.000287
S221S221StcGtcT11AY.120.2.10.000498
S221S221StcGtcT11AY.16.10.00047
S221S221StcGtcT11AY.240.000431
S221S221StcGtcT11AY.310.018519
S221S221StcGtcT11AY.320.000532
S221S221StcGtcT11AY.34.10.00051
S221S221StcGtcT11AY.350.000233
S221S221StcGtcA11AY.4.10.000737
S221S221StcGtcT11AY.46.10.001027
S221S221StcGtcC11AY.46.20.000635
S221S221StcGtcT11AY.46.30.000934
S221S221StcGtcT11AY.510.000909
S221S221StcGtcT11AY.570.000656
S221S221StcGtcT11AY.580.000907
S221S221StcGtcT11AY.640.000595
S221S221StcGtcT11AY.650.000533
S221S221StcGtcT11AY.660.00107
S221S221StcGtcC11AY.80.000606
S221S221StcGtcT11AY.810.001992
S221S221StcGtcT11AY.870.000833
S221S221StcGtcT11AY.910.00073
S221S221StcGtcT11AY.960.002075
S221S221StcGtcT11AY.990.001049
S221S221StcGtcT11B.1.1.1010.01
S221S221StcGtcT11B.1.1.1170.009709
S221S221StcGtcA11B.1.1.1350.004695
S221S221StcGtcT11B.1.1.1480.008772
S221S221StcGtcA11B.1.1.1570.000913
S221S221StcGtcT11B.1.1.1710.003676
S221S221StcGtcC11B.1.1.1860.003436
S221S221StcGtcT11B.1.1.1920.002309
S221S221StcGtcT11B.1.1.2430.004082
S221S221StcGtcT11B.1.1.250.000569
S221S221StcGtcA11B.1.1.2530.002506
S221S221StcGtcT11B.1.1.2550.00303
S221S221StcGtcT11B.1.1.2740.005051
S221S221StcGtcT11B.1.1.2790.001121
S221S221StcGtcT11B.1.1.2860.002899
S221S221StcGtcA11B.1.1.2940.001266
S221S221StcGtcT11B.1.1.3110.000358
S221S221StcGtcA11B.1.1.340.013158
S221S221StcGtcT11B.1.1.3440.010753
S221S221StcGtcT11B.1.1.3690.000446
S221S221StcGtcT11B.1.1.3960.045455
S221S221StcGtcT11B.1.1.4090.002833
S221S221StcGtcT11B.1.1.4640.001473
S221S221StcGtcT11B.1.1.4660.008696
S221S221StcGtcT11B.1.1.4870.005587
S221S221StcGtcT11B.1.1.5230.001563
S221S221StcGtcT11B.1.110.30.000718
S221S221StcGtcT11B.1.1150.021739
S221S221StcGtcT11B.1.1180.006711
S221S221StcGtcT11B.1.1260.001276
S221S221StcGtcT11B.1.140.017544
S221S221StcGtcT11B.1.1430.021277
S221S221StcGtcT11B.1.1470.000756
S221S221StcGtcT11B.1.160.190.035714
S221S221StcGtcT11B.1.1700.00431
S221S221StcGtcT11B.1.177.110.001698
S221S221StcGtcT11B.1.177.120.000152
S221S221StcGtcT11B.1.177.240.001295
S221S221StcGtcC11B.1.177.320.00135
S221S221StcGtcA11B.1.177.350.000691
S221S221StcGtcA11B.1.177.40.000211
S221S221StcGtcT11B.1.177.410.0025
S221S221StcGtcT11B.1.177.420.000894
S221S221StcGtcT11B.1.177.530.002392
S221S221StcGtcT11B.1.177.560.000668
S221S221StcGtcT11B.1.177.570.000281
S221S221StcGtcT11B.1.177.580.001332
S221S221StcGtcT11B.1.177.680.015152
S221S221StcGtcT11B.1.177.710.010101
S221S221StcGtcT11B.1.177.730.000566
S221S221StcGtcT11B.1.177.780.009709
S221S221StcGtcT11B.1.177.790.002342
S221S221StcGtcT11B.1.177.830.001481
S221S221StcGtcT11B.1.1890.004292
S221S221StcGtcT11B.1.214.10.02
S221S221StcGtcT11B.1.220.001318
S221S221StcGtcT11B.1.2380.014925
S221S221StcGtcT11B.1.2470.014925
S221S221StcGtcT11B.1.258.70.001912
S221S221StcGtcT11B.1.2740.011905
S221S221StcGtcA11B.1.3330.010526
S221S221StcGtcT11B.1.3480.018182
S221S221StcGtcT11B.1.3550.011111
S221S221StcGtcT11B.1.36.160.001425
S221S221StcGtcT11B.1.36.260.002857
S221S221StcGtcT11B.1.36.310.001751
S221S221StcGtcT11B.1.36.80.001
S221S221StcGtcT11B.1.3610.001289
S221S221StcGtcT11B.1.3800.006623
S221S221StcGtcC11B.1.4170.028571
S221S221StcGtcT11B.1.4700.001404
S221S221StcGtcT11B.1.4740.001901
S221S221StcGtcT11B.1.4970.000315
S221S221StcGtcT11B.1.4990.00105
S221S221StcGtcT11B.1.5090.000866
S221S221StcGtcT11B.1.5380.008065
S221S221StcGtcA11B.1.5610.000397
S221S221StcGtcA11B.1.5670.003333
S221S221StcGtcT11B.1.5700.002941
S221S221StcGtcT11B.1.5740.002151
S221S221StcGtcT11B.1.5760.000907
S221S221StcGtcT11B.1.5780.017857
S221S221StcGtcT11B.1.5800.004065
S221S221StcGtcC11B.1.5890.007576
S221S221StcGtcT11B.1.5930.01087
S221S221StcGtcT11B.1.5950.000261
S221S221StcGtcA11B.1.6090.000479
S221S221StcGtcC11B.1.6100.003546
S221S221StcGtcT11B.1.621.10.000506
S221S221StcGtcA11B.1.6230.000536
S221S221StcGtcA11B.1.6340.003425
S221S221StcGtcT11B.230.002924
S221S221StcGtcA11B.30.000831
S221S221StcGtcA11B.4.50.011905
S221S221StcGtcT11B.610.005747
S221S221StcGtcA11C.140.004329
S221S221StcGtcC11D.20.000075
S221S221StcGtcA11N.10.016949
S221S221StcGtcT11N.50.001767
S221S221StcGtcT11N.60.007092
S221S221StcGtcT11N.90.005952
S221S221StcGtcT11P.1.70.000319
S221S221StcGtcT11P.30.001595
S221S221StcGtcT11Q.40.000455
S221S221StcGtcT11S.10.00495

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.