CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = S12P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S12S12PnonsynTctCct1421380.97183121596-21598
S12S12PnonsynTcTCcA14230.021126821596-21598
S12S12PnonsynTcTCcG14210.0070422521596-21598

Details of the mutation S12P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S12S12PTctCct138142All0.000026
S12S12PTcTCcA3142All0.000001
S12S12PTcTCcG1142All0
S12S12PTctCct9394B.1.1.70.000083
S12S12PTcTCcG194B.1.1.70.000001
S12S12PTctCct55AY.40.000008
S12S12PTctCct55AY.430.000022
S12S12PTcTCcA240.111111
S12S12PTctCct240.111111
S12S12PTctCct44AY.1030.000025
S12S12PTctCct33B.1.20.000026
S12S12PTctCct22AY.3.10.000171
S12S12PTctCct22B.10.000018
S12S12PTctCct22B.1.1.2860.005797
S12S12PTctCct22B.1.4290.000047
S12S12PTctCct22B.1.617.20.000008
S12S12PTctCct11A.2.20.001689
S12S12PTctCct11A.2.40.003367
S12S12PTctCct11AY.1200.000037
S12S12PTctCct11AY.290.000016
S12S12PTctCct11AY.30.00001
S12S12PTcTCcA11AY.420.00004
S12S12PTctCct11AY.440.000006
S12S12PTctCct11AY.46.10.001027
S12S12PTctCct11AY.540.000095
S12S12PTctCct11B.1.10.000018
S12S12PTctCct11B.1.1.1570.000913
S12S12PTctCct11B.1.1.5190.00004
S12S12PTctCct11B.1.1390.000733
S12S12PTctCct11B.1.1770.000013
S12S12PTctCct11B.1.360.000146
S12S12PTctCct11B.1.4530.003236
S12S12PTctCct11P.1.140.000048