CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = S1239S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1239S1239SsynagTagC24882488125277-25279

Details of the mutation S1239S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1239S1239SagTagC24882488All0.000476
S1239S1239SagTagC21052105AY.140.185267
S1239S1239SagTagC4444B.1.617.20.000166
S1239S1239SagTagC3333AY.190.037628
S1239S1239SagTagC3030AY.540.00286
S1239S1239SagTagC2424B.1.5750.007282
S1239S1239SagTagC2121AY.40.000033
S1239S1239SagTagC2020AY.380.009985
S1239S1239SagTagC1818AY.440.00011
S1239S1239SagTagC1515AY.640.008929
S1239S1239SagTagC1313AY.980.001027
S1239S1239SagTagC1212AY.130.001932
S1239S1239SagTagC1212AY.780.01849
S1239S1239SagTagC1212B.1.1.4300.5
S1239S1239SagTagC1010B.1.1.5190.000397
S1239S1239SagTagC99B.1.20.000079
S1239S1239SagTagC88B.1.1.70.000007
S1239S1239SagTagC77AY.430.000031
S1239S1239SagTagC66AY.680.001642
S1239S1239SagTagC66AY.75.10.001082
S1239S1239SagTagC66B.10.000055
S1239S1239SagTagC66P.1.20.006936
S1239S1239SagTagC55AY.620.002179
S1239S1239SagTagC44AY.1190.000141
S1239S1239SagTagC44B.1.1.390.002039
S1239S1239SagTagC33AY.1030.000019
S1239S1239SagTagC33AY.260.000085
S1239S1239SagTagC33AY.590.001589
S1239S1239SagTagC33AY.750.000168
S1239S1239SagTagC33AY.870.002498
S1239S1239SagTagC22AY.1020.000053
S1239S1239SagTagC22AY.1200.000074
S1239S1239SagTagC22AY.30.00002
S1239S1239SagTagC22AY.460.000208
S1239S1239SagTagC22AY.470.000062
S1239S1239SagTagC22AY.650.001066
S1239S1239SagTagC22B.1.10.000036
S1239S1239SagTagC22P.20.000373
S1239S1239SagTagC11A0.000387
S1239S1239SagTagC11A.270.001656
S1239S1239SagTagC11AY.1170.000085
S1239S1239SagTagC11AY.1210.000135
S1239S1239SagTagC11AY.160.00038
S1239S1239SagTagC11AY.200.000039
S1239S1239SagTagC11AY.230.00007
S1239S1239SagTagC11AY.290.000016
S1239S1239SagTagC11AY.300.000396
S1239S1239SagTagC11AY.320.000532
S1239S1239SagTagC11AY.340.000097
S1239S1239SagTagC11AY.390.000025
S1239S1239SagTagC11AY.490.003195
S1239S1239SagTagC11AY.50.000021
S1239S1239SagTagC11AY.500.000799
S1239S1239SagTagC11AY.510.000909
S1239S1239SagTagC11AY.70.000196
S1239S1239SagTagC11AY.720.001361
S1239S1239SagTagC11AY.860.00083
S1239S1239SagTagC11AY.9.20.000037
S1239S1239SagTagC11B.1.1.250.000569
S1239S1239SagTagC11B.1.2430.00007
S1239S1239SagTagC11B.1.3550.011111
S1239S1239SagTagC11B.1.5180.011765
S1239S1239SagTagC11B.1.6300.005236
S1239S1239SagTagC11C.370.000116
S1239S1239SagTagC11D.20.000075