CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R682L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S682R682LnonsyncGgcTg1921870.97395823606-23608
S682R682LnonsynCGgTTg19230.01562523606-23608
S682R682LnonsyncGGcTA19220.010416723606-23608

Details of the mutation R682L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S682R682LcGgcTg187192All0.000036
S682R682LCGgTTg3192All0.000001
S682R682LcGGcTA2192All0
S682R682LcGgcTg3838B.1.617.20.000143
S682R682LcGgcTg2020B.1.1.70.000018
S682R682LcGgcTg1919AY.40.00003
S682R682LcGgcTg1315A.10.003664
S682R682LCGgTTg215A.10.000564
S682R682LcGgcTg88AY.1030.00005
S682R682LcGgcTg78AY.30.00007
S682R682LCGgTTg18AY.30.00001
S682R682LcGgcTg77AY.430.000031
S682R682LcGgcTg77B.10.000064
S682R682LcGgcTg55AY.250.00003
S682R682LcGGcTA240.111111
S682R682LcGgcTg240.111111
S682R682LcGgcTg44AY.390.000099
S682R682LcGgcTg44AY.4.50.00043
S682R682LcGgcTg44B.1.1600.000125
S682R682LcGgcTg33AY.200.000117
S682R682LcGgcTg33B0.000383
S682R682LcGgcTg22AY.160.000759
S682R682LcGgcTg22AY.290.000032
S682R682LcGgcTg22AY.440.000012
S682R682LcGgcTg22AY.50.000041
S682R682LcGgcTg22AY.670.000929
S682R682LcGgcTg22AY.90.000135
S682R682LcGgcTg22AY.930.000546
S682R682LcGgcTg22B.1.10.000036
S682R682LcGgcTg22B.1.20.000018
S682R682LcGgcTg22D.20.00015
S682R682LcGgcTg11AY.1000.000046
S682R682LcGgcTg11AY.120.000316
S682R682LcGgcTg11AY.1200.000037
S682R682LcGgcTg11AY.230.00007
S682R682LcGgcTg11AY.260.000028
S682R682LcGgcTg11AY.340.000097
S682R682LcGgcTg11AY.39.10.00004
S682R682LcGgcTg11AY.4.20.000022
S682R682LcGgcTg11AY.410.000294
S682R682LcGgcTg11AY.420.00004
S682R682LcGgcTg11AY.46.50.000198
S682R682LcGgcTg11AY.470.000031
S682R682LcGgcTg11AY.5.40.000277
S682R682LcGgcTg11AY.630.000387
S682R682LcGgcTg11AY.7.20.000559
S682R682LcGgcTg11AY.840.000437
S682R682LcGgcTg11AY.980.000079
S682R682LcGgcTg11B.1.1.2690.001353
S682R682LcGgcTg11B.1.3290.000608
S682R682LcGgcTg11B.1.3510.00003
S682R682LcGgcTg11B.1.3670.000792
S682R682LcGgcTg11B.1.4270.00005
S682R682LcGgcTg11B.1.4290.000024