CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R346S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S346R346SnonsynagAagC249423320.93504422598-22600
S346R346SnonsynagAagT24941620.064955922598-22600

Details of the mutation R346S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S346R346SagAagC23322494All0.000446
S346R346SagAagT1622494All0.000031
S346R346SagAagC17281729C.36.30.980147
S346R346SagAagT11729C.36.30.000567
S346R346SagAagC328328C.36.3.10.891304
S346R346SagAagC4873AY.40.000075
S346R346SagAagT2573AY.40.000039
S346R346SagAagC4445B.10.000403
S346R346SagAagT145B.10.000009
S346R346SagAagT3042B.1.1.70.000027
S346R346SagAagC1242B.1.1.70.000011
S346R346SagAagC2134AY.250.000126
S346R346SagAagT1334AY.250.000078
S346R346SagAagC3434C.360.030965
S346R346SagAagC2929P.40.110266
S346R346SagAagT1922B.1.617.20.000072
S346R346SagAagC322B.1.617.20.000011
S346R346SagAagC2121B.1.5760.019039
S346R346SagAagT1414AY.730.009315
S346R346SagAagT99AQ.21
S346R346SagAagC88AY.1200.000297
S346R346SagAagC77B.1.10.000127
S346R346SagAagT66AY.260.00017
S346R346SagAagT55AY.1190.000177
S346R346SagAagT45AY.430.000018
S346R346SagAagC15AY.430.000004
S346R346SagAagT45AY.920.001149
S346R346SagAagC15AY.920.000287
S346R346SagAagT35B.1.20.000026
S346R346SagAagC25B.1.20.000018
S346R346SagAagC44B.1.1.2940.005063
S346R346SagAagT44B.1.1080.023256
S346R346SagAagC33AY.1000.000138
S346R346SagAagT33AY.1030.000019
S346R346SagAagC23AY.450.000243
S346R346SagAagT13AY.450.000122
S346R346SagAagC23AY.750.000112
S346R346SagAagT13AY.750.000056
S346R346SagAagC23B.1.5170.000854
S346R346SagAagT13B.1.5170.000427
S346R346SagAagT22A.2.50.000998
S346R346SagAagC22AY.1160.000574
S346R346SagAagT12AY.440.000006
S346R346SagAagC12AY.440.000006
S346R346SagAagC12AY.550.000917
S346R346SagAagT12AY.550.000917
S346R346SagAagC22B.1.1.3720.001377
S346R346SagAagC22B.1.810.042553
S346R346SagAagT22D.20.00015
S346R346SagAagT22P.10.000032
S346R346SagAagC11A.20.000662
S346R346SagAagT11AD.20.000219
S346R346SagAagT11AY.1020.000027
S346R346SagAagT11AY.1170.000085
S346R346SagAagC11AY.120.000316
S346R346SagAagT11AY.230.00007
S346R346SagAagC11AY.270.000065
S346R346SagAagC11AY.390.000025
S346R346SagAagT11AY.4.20.000022
S346R346SagAagT11AY.46.50.000198
S346R346SagAagT11AY.590.00053
S346R346SagAagC11AY.60.000041
S346R346SagAagC11AY.690.000187
S346R346SagAagC11AY.700.000209
S346R346SagAagC11AY.75.10.00018
S346R346SagAagC11AY.90.000068
S346R346SagAagC11AY.910.00073
S346R346SagAagC11B0.000128
S346R346SagAagC11B.1.1.10.000327
S346R346SagAagC11B.1.1.1740.003378
S346R346SagAagC11B.1.1.3120.001912
S346R346SagAagT11B.1.1770.000013
S346R346SagAagC11B.1.2210.000071
S346R346SagAagC11B.1.2580.000067
S346R346SagAagT11B.1.3490.000715
S346R346SagAagC11B.1.3510.00003
S346R346SagAagC11B.1.3750.00082
S346R346SagAagC11B.1.4290.000024
S346R346SagAagC11B.1.5260.000024
S346R346SagAagC11B.1.617.10.000129
S346R346SagAagC11C.160.00106
S346R346SagAagC11C.370.000116
S346R346SagAagC11C.390.018868
S346R346SagAagT11Q.10.000126