CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R21T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S21R21TnonsynaGaaCa66556655121623-21625

Details of the mutation R21T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S21R21TaGaaCa66556655All0.001273
S21R21TaGaaCa45804580AY.700.954962
S21R21TaGaaCa449449B.1.1.70.000402
S21R21TaGaaCa334334AY.1020.008856
S21R21TaGaaCa233233AY.40.000363
S21R21TaGaaCa233233P.1.140.011138
S21R21TaGaaCa148148B.1.617.20.000557
S21R21TaGaaCa101101AY.4.20.002191
S21R21TaGaaCa3636AY.430.000159
S21R21TaGaaCa2929B.1.1.3581
S21R21TaGaaCa2727P.10.000425
S21R21TaGaaCa2626AY.1030.000161
S21R21TaGaaCa2424AY.750.001345
S21R21TaGaaCa2424B.10.00022
S21R21TaGaaCa2323AY.440.00014
S21R21TaGaaCa2222B.1.4290.000518
S21R21TaGaaCa2121AY.250.000126
S21R21TaGaaCa2020AY.350.004661
S21R21TaGaaCa2020AY.540.001907
S21R21TaGaaCa1919B.1.10.000345
S21R21TaGaaCa1616C.370.001857
S21R21TaGaaCa1515B.1.3510.000446
S21R21TaGaaCa1111AY.4.2.10.001639
S21R21TaGaaCa1010B.1.1770.000132
S21R21TaGaaCa1010B.1.20.000088
S21R21TaGaaCa1010B.1.6370.000731
S21R21TaGaaCa99B.1.617.10.001161
S21R21TaGaaCa88B.1.1.3170.003294
S21R21TaGaaCa88P.1.150.001859
S21R21TaGaaCa88P.20.001493
S21R21TaGaaCa77B.1.5260.000165
S21R21TaGaaCa66B.1.5950.001566
S21R21TaGaaCa55A.2.5.30.051546
S21R21TaGaaCa55AY.30.00005
S21R21TaGaaCa55AY.330.000334
S21R21TaGaaCa55AY.99.20.000461
S21R21TaGaaCa55B.1.466.20.001956
S21R21TaGaaCa55R.10.00045
S21R21TaGaaCa44AY.9.20.000147
S21R21TaGaaCa44B.1.1.1360.085106
S21R21TaGaaCa44B.1.4270.000202
S21R21TaGaaCa33A.2.5.20.004717
S21R21TaGaaCa33AH.30.011407
S21R21TaGaaCa33AY.1140.000693
S21R21TaGaaCa33AY.200.000117
S21R21TaGaaCa33AY.4.50.000322
S21R21TaGaaCa33AY.420.000121
S21R21TaGaaCa33AY.470.000093
S21R21TaGaaCa33B.1.1.2220.000612
S21R21TaGaaCa33B.1.1.2260.017442
S21R21TaGaaCa33B.1.1600.000094
S21R21TaGaaCa33B.1.2400.000647
S21R21TaGaaCa33B.470.061224
S21R21TaGaaCa33D.20.000225
S21R21TaGaaCa33N.50.0053
S21R21TaGaaCa22AY.1170.000169
S21R21TaGaaCa22AY.1200.000074
S21R21TaGaaCa22AY.130.000322
S21R21TaGaaCa22AY.270.000129
S21R21TaGaaCa22AY.390.000049
S21R21TaGaaCa22AY.39.10.000079
S21R21TaGaaCa22AY.4.40.000818
S21R21TaGaaCa22AY.450.000243
S21R21TaGaaCa22AY.530.000575
S21R21TaGaaCa22AY.610.00021
S21R21TaGaaCa22AY.75.10.000361
S21R21TaGaaCa22AY.920.000575
S21R21TaGaaCa22B.1.1.2070.002364
S21R21TaGaaCa22B.1.1.3110.000716
S21R21TaGaaCa22B.1.1.3260.003521
S21R21TaGaaCa22B.1.177.600.000437
S21R21TaGaaCa22B.1.2410.001623
S21R21TaGaaCa22B.1.6050.011905
S21R21TaGaaCa22L.30.007092
S21R21TaGaaCa11A0.000387
S21R21TaGaaCa11A.2.50.000499
S21R21TaGaaCa11AY.1190.000035
S21R21TaGaaCa11AY.260.000028
S21R21TaGaaCa11AY.300.000396
S21R21TaGaaCa11AY.50.000021
S21R21TaGaaCa11AY.60.000041
S21R21TaGaaCa11AY.9.10.000084
S21R21TaGaaCa11AY.900.000684
S21R21TaGaaCa11AY.98.10.000048
S21R21TaGaaCa11B0.000128
S21R21TaGaaCa11B.1.1.10.000327
S21R21TaGaaCa11B.1.1.1330.008475
S21R21TaGaaCa11B.1.1.2160.00089
S21R21TaGaaCa11B.1.1.2320.001815
S21R21TaGaaCa11B.1.1.2770.000759
S21R21TaGaaCa11B.1.1.3020.002075
S21R21TaGaaCa11B.1.1.3700.012658
S21R21TaGaaCa11B.1.1.4110.014706
S21R21TaGaaCa11B.1.1.4420.018519
S21R21TaGaaCa11B.1.1.480.002874
S21R21TaGaaCa11B.1.1.5190.00004
S21R21TaGaaCa11B.1.1110.001175
S21R21TaGaaCa11B.1.177.750.001041
S21R21TaGaaCa11B.1.2060.000816
S21R21TaGaaCa11B.1.2320.000537
S21R21TaGaaCa11B.1.2430.00007
S21R21TaGaaCa11B.1.2580.000067
S21R21TaGaaCa11B.1.258.30.001675
S21R21TaGaaCa11B.1.2600.003344
S21R21TaGaaCa11B.1.3110.000275
S21R21TaGaaCa11B.1.360.000146
S21R21TaGaaCa11B.1.36.270.000763
S21R21TaGaaCa11B.1.3690.000285
S21R21TaGaaCa11B.1.3930.028571
S21R21TaGaaCa11B.1.438.10.000107
S21R21TaGaaCa11B.1.5680.001111
S21R21TaGaaCa11B.1.5750.000303
S21R21TaGaaCa11B.400.000364
S21R21TaGaaCa11C.160.00106
S21R21TaGaaCa11C.310.017857
S21R21TaGaaCa11P.1.120.000484
S21R21TaGaaCa11P.1.70.000319
S21R21TaGaaCa11Q.10.000126
S21R21TaGaaCa11Q.30.000145
S21R21TaGaaCa11Q.80.000165