CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R21I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S21R21InonsynaGaaTa662766240.99954721623-21625
S21R21InonsynaGAaTT662730.00045269421623-21625

Details of the mutation R21I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S21R21IaGaaTa66246627All0.001267
S21R21IaGAaTT36627All0.000001
S21R21IaGaaTa14741474AY.40.002294
S21R21IaGaaTa890890B.1.1.2790.997758
S21R21IaGaaTa852852B.1.1.70.000763
S21R21IaGaaTa384384AY.430.001701
S21R21IaGaaTa314314B.1.617.20.001182
S21R21IaGaaTa217217AY.440.001321
S21R21IaGaaTa204204B.1.10.003701
S21R21IaGaaTa172172B.1.1.3650.960894
S21R21IaGaaTa171171B.1.1.2370.924324
S21R21IaGaaTa160160B.1.1.3630.958084
S21R21IaGaaTa145145C.37.10.379581
S21R21IaGaaTa102102B.1.20.000898
S21R21IaGaaTa9898AY.1030.000608
S21R21IaGaaTa9090AY.30.000895
S21R21IaGaaTa6868AY.98.10.003293
S21R21IaGaaTa6060B.1.1.1490.983607
S21R21IaGaaTa5757P.1.140.002725
S21R21IaGaaTa5656AY.390.001384
S21R21IaGaaTa5353B.10.000485
S21R21IaGaaTa4949P.10.000772
S21R21IaGaaTa4343B.1.1770.000566
S21R21IaGaaTa4040AY.1170.003381
S21R21IaGaaTa3939P.1.100.010509
S21R21IaGaaTa3232AY.1200.00119
S21R21IaGaaTa3232B.1.1.3601
S21R21IaGaaTa2929R.10.00261
S21R21IaGaaTa2828B.1.1.3790.875
S21R21IaGaaTa2727AY.120.008534
S21R21IaGaaTa2626AY.250.000156
S21R21IaGaaTa2222AY.50.000454
S21R21IaGaaTa2222B.1.4290.000518
S21R21IaGaaTa2121AY.1020.000557
S21R21IaGaaTa2020B.1.3510.000595
S21R21IaGaaTa1919AY.290.0003
S21R21IaGaaTa1818AY.46.60.0013
S21R21IaGaaTa1717AY.260.000481
S21R21IaGaaTa1515AY.860.012448
S21R21IaGaaTa1414B.1.5260.000329
S21R21IaGaaTa1313AY.450.001582
S21R21IaGaaTa1313AY.830.022414
S21R21IaGaaTa1313B.1.1.301
S21R21IaGaaTa1212AY.610.001257
S21R21IaGaaTa1212C.370.001393
S21R21IaGaaTa1111AY.1040.021825
S21R21IaGaaTa1111AY.60.000452
S21R21IaGaaTa1010AY.1000.00046
S21R21IaGaaTa1010B.1.1600.000312
S21R21IaGaaTa1010B.1.177.730.005663
S21R21IaGaaTa1010B.1.1950.050251
S21R21IaGaaTa1010B.1.3110.002746
S21R21IaGaaTa99AY.1210.001218
S21R21IaGaaTa99AY.330.000601
S21R21IaGaaTa99B.1.1.5190.000357
S21R21IaGaaTa99B.1.177.210.000688
S21R21IaGaaTa88AY.470.000249
S21R21IaGaaTa77AY.1190.000247
S21R21IaGaaTa77AY.140.000616
S21R21IaGaaTa77AY.4.20.000152
S21R21IaGaaTa77AY.420.000282
S21R21IaGaaTa77AY.460.000729
S21R21IaGaaTa77B.1.2580.000466
S21R21IaGaaTa66AY.1180.000376
S21R21IaGaaTa66AY.200.000233
S21R21IaGaaTa66AY.9.20.00022
S21R21IaGaaTa66B.1.1.2220.001224
S21R21IaGaaTa66B.1.617.10.000774
S21R21IaGaaTa55AY.1130.000712
S21R21IaGaaTa55AY.9.10.000419
S21R21IaGaaTa55B.1.2320.002687
S21R21IaGaaTa55B.1.2520.033113
S21R21IaGaaTa55B.1.4270.000252
S21R21IaGaaTa55C.36.30.002836
S21R21IaGaaTa44AY.1010.001962
S21R21IaGaaTa44AY.116.10.001246
S21R21IaGaaTa44AY.230.000279
S21R21IaGaaTa44AY.360.000593
S21R21IaGaaTa44AY.39.10.000158
S21R21IaGAaTT34AY.520.002443
S21R21IaGaaTa14AY.520.000814
S21R21IaGaaTa44AY.840.00175
S21R21IaGaaTa44AY.980.000316
S21R21IaGaaTa44B0.000511
S21R21IaGaaTa44B.1.177.120.000607
S21R21IaGaaTa44B.1.177.600.000874
S21R21IaGaaTa44B.1.2060.003263
S21R21IaGaaTa44B.1.351.20.00121
S21R21IaGaaTa44B.1.360.000584
S21R21IaGaaTa44C.360.003643
S21R21IaGaaTa44P.20.000747
S21R21IaGaaTa44Q.10.000505
S21R21IaGaaTa33A.23.10.002113
S21R21IaGaaTa33AY.1060.001005
S21R21IaGaaTa33AY.70.000588
S21R21IaGaaTa33AY.7.10.000338
S21R21IaGaaTa33AY.7.20.001678
S21R21IaGaaTa33AY.740.000347
S21R21IaGaaTa33B.1.1.280.000934
S21R21IaGaaTa33B.1.1.2840.000322
S21R21IaGaaTa33B.1.1.3550.046154
S21R21IaGaaTa33B.1.1.3690.001339
S21R21IaGaaTa33B.1.1.700.001023
S21R21IaGaaTa33B.1.2430.000209
S21R21IaGaaTa33B.1.390.011719
S21R21IaGaaTa33B.1.5760.00272
S21R21IaGaaTa33N.50.0053
S21R21IaGaaTa33P.1.120.001452
S21R21IaGaaTa33P.1.150.000697
S21R21IaGaaTa33P.1.20.003468
S21R21IaGaaTa22A0.000774
S21R21IaGaaTa22A.2.50.000998
S21R21IaGaaTa22AY.1090.001479
S21R21IaGaaTa22AY.270.000129
S21R21IaGaaTa22AY.340.000194
S21R21IaGaaTa22AY.350.000466
S21R21IaGaaTa22AY.4.2.10.000298
S21R21IaGaaTa22AY.540.000191
S21R21IaGaaTa22AY.680.000547
S21R21IaGaaTa22AY.750.000112
S21R21IaGaaTa22AY.90.000135
S21R21IaGaaTa22AY.930.000546
S21R21IaGaaTa22AY.940.000885
S21R21IaGaaTa22B.1.1.3710.020833
S21R21IaGaaTa22B.1.1110.00235
S21R21IaGaaTa22B.1.130.004751
S21R21IaGaaTa22B.1.2100.004264
S21R21IaGaaTa22B.1.258.170.000208
S21R21IaGaaTa22B.1.3130.013158
S21R21IaGaaTa22B.1.351.30.001753
S21R21IaGaaTa22B.1.36.310.003503
S21R21IaGaaTa22B.1.3980.005952
S21R21IaGaaTa22B.1.617.30.00597
S21R21IaGaaTa22B.1.6210.000177
S21R21IaGaaTa22B.1.6370.000146
S21R21IaGaaTa22B.6.50.153846
S21R21IaGaaTa22P.1.70.000639
S21R21IaGaaTa22Q.30.00029
S21R21IaGaaTa22V.10.045455
S21R21IaGaaTa110.055556
S21R21IaGaaTa11AE.80.000489
S21R21IaGaaTa11AY.10.000396
S21R21IaGaaTa11AY.1160.000287
S21R21IaGaaTa11AY.130.000161
S21R21IaGaaTa11AY.160.00038
S21R21IaGaaTa11AY.16.10.00047
S21R21IaGaaTa11AY.20.000356
S21R21IaGaaTa11AY.280.00189
S21R21IaGaaTa11AY.320.000532
S21R21IaGaaTa11AY.4.40.000409
S21R21IaGaaTa11AY.4.50.000107
S21R21IaGaaTa11AY.46.20.000635
S21R21IaGaaTa11AY.5.20.002463
S21R21IaGaaTa11AY.5.30.000337
S21R21IaGaaTa11AY.5.40.000277
S21R21IaGaaTa11AY.550.000917
S21R21IaGaaTa11AY.580.000907
S21R21IaGaaTa11AY.590.00053
S21R21IaGaaTa11AY.630.000387
S21R21IaGaaTa11AY.690.000187
S21R21IaGaaTa11AY.700.000209
S21R21IaGaaTa11AY.780.001541
S21R21IaGaaTa11AY.820.001357
S21R21IaGaaTa11AY.880.000884
S21R21IaGaaTa11AY.900.000684
S21R21IaGaaTa11AY.920.000287
S21R21IaGaaTa11AY.960.002075
S21R21IaGaaTa11AY.990.001049
S21R21IaGaaTa11B.1.1.1010.01
S21R21IaGaaTa11B.1.1.1110.014706
S21R21IaGaaTa11B.1.1.1760.000439
S21R21IaGaaTa11B.1.1.2260.005814
S21R21IaGaaTa11B.1.1.2770.000759
S21R21IaGaaTa11B.1.1.290.010309
S21R21IaGaaTa11B.1.1.2940.001266
S21R21IaGaaTa11B.1.1.3060.000438
S21R21IaGaaTa11B.1.1.3070.002532
S21R21IaGaaTa11B.1.1.3180.000302
S21R21IaGaaTa11B.1.1.3260.001761
S21R21IaGaaTa11B.1.1.330.000421
S21R21IaGaaTa11B.1.1.370.000193
S21R21IaGaaTa11B.1.1.3780.007299
S21R21IaGaaTa11B.1.1.4060.006494
S21R21IaGaaTa11B.1.1.4160.000905
S21R21IaGaaTa11B.1.1.510.001718
S21R21IaGaaTa11B.1.1420.002899
S21R21IaGaaTa11B.1.1470.000756
S21R21IaGaaTa11B.1.177.170.000821
S21R21IaGaaTa11B.1.177.560.000668
S21R21IaGaaTa11B.1.177.80.000752
S21R21IaGaaTa11B.1.177.820.000477
S21R21IaGaaTa11B.1.177.90.001332
S21R21IaGaaTa11B.1.2210.000071
S21R21IaGaaTa11B.1.221.20.004016
S21R21IaGaaTa11B.1.258.70.001912
S21R21IaGaaTa11B.1.2790.000514
S21R21IaGaaTa11B.1.2980.002114
S21R21IaGaaTa11B.1.3010.005917
S21R21IaGaaTa11B.1.3150.006061
S21R21IaGaaTa11B.1.3360.002439
S21R21IaGaaTa11B.1.3490.000715
S21R21IaGaaTa11B.1.36.160.001425
S21R21IaGaaTa11B.1.36.170.000494
S21R21IaGaaTa11B.1.36.220.001208
S21R21IaGaaTa11B.1.3610.001289
S21R21IaGaaTa11B.1.3690.000285
S21R21IaGaaTa11B.1.3910.001127
S21R21IaGaaTa11B.1.3960.000706
S21R21IaGaaTa11B.1.4130.004255
S21R21IaGaaTa11B.1.438.10.000107
S21R21IaGaaTa11B.1.4970.000315
S21R21IaGaaTa11B.1.5170.000427
S21R21IaGaaTa11B.1.5240.001406
S21R21IaGaaTa11B.1.5330.009615
S21R21IaGaaTa11B.1.5640.000426
S21R21IaGaaTa11B.1.5650.00081
S21R21IaGaaTa11B.1.5960.000087
S21R21IaGaaTa11B.1.6190.000871
S21R21IaGaaTa11B.1.6200.000946
S21R21IaGaaTa11B.1.6230.000536
S21R21IaGaaTa11B.3.10.001658
S21R21IaGaaTa11P.1.10.20.041667
S21R21IaGaaTa11P.1.160.000374
S21R21IaGaaTa11P.1.170.000162
S21R21IaGaaTa11Q.70.001111