CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R158S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S158R158SnonsynagAagC364435990.98765122034-22036
S158R158SnonsynagAagT3644450.012349122034-22036

Details of the mutation R158S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S158R158SagAagC35993644All0.000688
S158R158SagAagT453644All0.000009
S158R158SagAagC27812781B.1.6280.979915
S158R158SagAagC290290B.1.6310.976431
S158R158SagAagC286286B.1.6340.979452
S158R158SagAagC9094B.10.000824
S158R158SagAagT494B.10.000037
S158R158SagAagC3641B.1.1.70.000032
S158R158SagAagT541B.1.1.70.000004
S158R158SagAagC914B.1.10.000163
S158R158SagAagT514B.1.10.000091
S158R158SagAagC1414B.1.6270.028283
S158R158SagAagC1314P.1.120.006292
S158R158SagAagT114P.1.120.000484
S158R158SagAagC88B.1.1.5190.000318
S158R158SagAagT68P.10.000095
S158R158SagAagC28P.10.000032
S158R158SagAagC77R.10.00063
S158R158SagAagC66A.2.50.002994
S158R158SagAagT35B.1.20.000026
S158R158SagAagC25B.1.20.000018
S158R158SagAagC24B.1.4290.000047
S158R158SagAagT24B.1.4290.000047
S158R158SagAagC44C.140.017316
S158R158SagAagC33AY.440.000018
S158R158SagAagT33B.1.1.5230.004687
S158R158SagAagC12AY.250.000006
S158R158SagAagT12AY.250.000006
S158R158SagAagC22AY.260.000057
S158R158SagAagT22AY.430.000009
S158R158SagAagC22AY.75.10.000361
S158R158SagAagC22B.1.1.2200.003717
S158R158SagAagC12B.1.1770.000013
S158R158SagAagT12B.1.1770.000013
S158R158SagAagC22B.1.177.730.001133
S158R158SagAagT22B.1.2400.000431
S158R158SagAagC22B.100.016529
S158R158SagAagC12C.370.000116
S158R158SagAagT12C.370.000116
S158R158SagAagC11A.10.000282
S158R158SagAagC11A.2.5.10.004808
S158R158SagAagC11A.2.5.20.001572
S158R158SagAagT11AY.1130.000142
S158R158SagAagC11AY.1160.000287
S158R158SagAagC11AY.116.10.000311
S158R158SagAagC11AY.230.00007
S158R158SagAagC11AY.30.00001
S158R158SagAagC11AY.750.000056
S158R158SagAagC11AY.9.20.000037
S158R158SagAagC11AY.960.002075
S158R158SagAagC11B0.000128
S158R158SagAagC11B.1.1.10.000327
S158R158SagAagC11B.1.1.1170.009709
S158R158SagAagT11B.1.1.1320.014925
S158R158SagAagT11B.1.1.1700.001247
S158R158SagAagC11B.1.1.2220.000204
S158R158SagAagC11B.1.1.2690.001353
S158R158SagAagC11B.1.1.3060.000438
S158R158SagAagC11B.1.1.3170.000412
S158R158SagAagT11B.1.1.3180.000302
S158R158SagAagT11B.1.1.4090.002833
S158R158SagAagC11B.1.1.4130.006897
S158R158SagAagC11B.1.1.500.000679
S158R158SagAagC11B.1.2320.000537
S158R158SagAagC11B.1.2410.000812
S158R158SagAagC11B.1.36.100.004785
S158R158SagAagC11B.1.3750.00082
S158R158SagAagT11B.1.4270.00005
S158R158SagAagC11B.1.4360.001029
S158R158SagAagC11B.1.5250.000113
S158R158SagAagC11B.1.5260.000024
S158R158SagAagC11B.1.5750.000303
S158R158SagAagT11B.1.5820.000491
S158R158SagAagC11B.1.5960.000087
S158R158SagAagC11B.1.617.10.000129
S158R158SagAagC11B.1.6190.000871
S158R158SagAagT11B.1.6370.000073
S158R158SagAagC11B.580.010204
S158R158SagAagC11P.1.100.000269
S158R158SagAagT11P.20.000187
S158R158SagAagC11Q.80.000165