CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = R158G

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S158R158GnonsynAgaGga252013525195500.99976822034-22036
S158R158GnonsynAgAGgT25201353530.00014007222034-22036
S158R158GnonsynAgAGgG25201351930.000076583222034-22036
S158R158GnonsynAgAGgC2520135390.000015475422034-22036

Details of the mutation R158G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S158R158GAgaGga25195502520135All0.481894
S158R158GAgAGgT3532520135All0.000068
S158R158GAgAGgG1932520135All0.000037
S158R158GAgAGgC392520135All0.000007
S158R158GAgaGga603096603172AY.40.938672
S158R158GAgAGgG56603172AY.40.000087
S158R158GAgAGgT18603172AY.40.000028
S158R158GAgAGgC2603172AY.40.000003
S158R158GAgaGga246025246071B.1.617.20.926386
S158R158GAgAGgG21246071B.1.617.20.000079
S158R158GAgAGgT14246071B.1.617.20.000053
S158R158GAgAGgC11246071B.1.617.20.000041
S158R158GAgaGga210348210362AY.430.931939
S158R158GAgAGgC7210362AY.430.000031
S158R158GAgAGgG5210362AY.430.000022
S158R158GAgAGgT2210362AY.430.000009
S158R158GAgaGga154123154277AY.250.927022
S158R158GAgAGgT154154277AY.250.000926
S158R158GAgaGga146279146302AY.1030.908255
S158R158GAgAGgC9146302AY.1030.000056
S158R158GAgAGgG9146302AY.1030.000056
S158R158GAgAGgT5146302AY.1030.000031
S158R158GAgaGga141062141078AY.440.858611
S158R158GAgAGgG14141078AY.440.000085
S158R158GAgAGgT2141078AY.440.000012
S158R158GAgaGga9263492649AY.30.921374
S158R158GAgAGgG892649AY.30.00008
S158R158GAgAGgT792649AY.30.00007
S158R158GAgaGga6334963354AY.290.999243
S158R158GAgAGgG563354AY.290.000079
S158R158GAgaGga4538645387AY.50.937185
S158R158GAgAGgG145387AY.50.000021
S158R158GAgaGga4530545306AY.4.20.982606
S158R158GAgAGgG145306AY.4.20.000022
S158R158GAgaGga3365933664AY.390.831764
S158R158GAgAGgG433664AY.390.000099
S158R158GAgAGgT133664AY.390.000025
S158R158GAgaGga3348133482AY.1020.887713
S158R158GAgAGgC133482AY.1020.000027
S158R158GAgaGga3210032118AY.260.908756
S158R158GAgAGgT1732118AY.260.000481
S158R158GAgAGgG132118AY.260.000028
S158R158GAgaGga3003330034AY.470.934181
S158R158GAgAGgC130034AY.470.000031
S158R158GAgaGga2497524975AY.1200.928542
S158R158GAgaGga2485824867AY.1190.877692
S158R158GAgAGgG824867AY.1190.000282
S158R158GAgAGgT124867AY.1190.000035
S158R158GAgaGga2485724857AY.9.20.912988
S158R158GAgaGga2340723412AY.200.909716
S158R158GAgAGgT323412AY.200.000117
S158R158GAgAGgG223412AY.200.000078
S158R158GAgaGga2270522718AY.60.933824
S158R158GAgAGgG1322718AY.60.000535
S158R158GAgaGga2264322645AY.39.10.896966
S158R158GAgAGgG222645AY.39.10.000079
S158R158GAgaGga2169121691AY.420.872631
S158R158GAgaGga1913319134AY.98.10.926627
S158R158GAgAGgC119134AY.98.10.000048
S158R158GAgaGga1857818581AY.1000.854711
S158R158GAgAGgC318581AY.1000.000138
S158R158GAgaGga1555615562AY.750.871485
S158R158GAgAGgG315562AY.750.000168
S158R158GAgAGgT315562AY.750.000168
S158R158GAgaGga1530415305AY.270.990486
S158R158GAgAGgG115305AY.270.000065
S158R158GAgaGga1442014430AY.1180.903396
S158R158GAgAGgT614430AY.1180.000376
S158R158GAgAGgG414430AY.1180.000251
S158R158GAgaGga1362913629AY.330.910117
S158R158GAgaGga1359713597AY.90.919089
S158R158GAgaGga1253012530AY.46.60.904758
S158R158GAgaGga1233712337AY.230.860501
S158R158GAgaGga1145111451AY.980.904574
S158R158GAgaGga1127611276AY.9.10.944072
S158R158GAgaGga1097810980AY.3.10.935971
S158R158GAgAGgG210980AY.3.10.000171
S158R158GAgaGga1024810248AY.140.901954
S158R158GAgaGga1000510006AY.1170.845588
S158R158GAgAGgT110006AY.1170.000085
S158R158GAgaGga97749774AY.99.20.900746
S158R158GAgaGga95049505AY.340.921555
S158R158GAgAGgT19505AY.340.000097
S158R158GAgaGga92809281AY.540.884821
S158R158GAgAGgT19281AY.540.000095
S158R158GAgaGga87808780AY.4.50.943782
S158R158GAgaGga84438443AY.7.10.951538
S158R158GAgaGga74927492AY.460.779767
S158R158GAgaGga74907492AY.610.784786
S158R158GAgAGgG27492AY.610.00021
S158R158GAgaGga69916991AY.740.808488
S158R158GAgaGga67756776AY.450.82441
S158R158GAgAGgG16776AY.450.000122
S158R158GAgaGga66676669AY.1210.902165
S158R158GAgAGgC26669AY.1210.000271
S158R158GAgaGga64366554AY.1130.916417
S158R158GAgAGgT1176554AY.1130.01666
S158R158GAgAGgG16554AY.1130.000142
S158R158GAgaGga64446454AY.4.2.10.960072
S158R158GAgAGgG106454AY.4.2.10.00149
S158R158GAgaGga59945994AY.360.888395
S158R158GAgaGga59225922AY.1100.667343
S158R158GAgaGga57405740AY.46.40.944234
S158R158GAgaGga53815381AY.130.866227
S158R158GAgaGga51035103AY.1110.934615
S158R158GAgaGga48904890AY.46.50.970238
S158R158GAgaGga48044804AY.690.896771
S158R158GAgaGga47594759AY.70.932771
S158R158GAgaGga46934693AY.75.10.846195
S158R158GAgaGga44354435AY.700.924729
S158R158GAgaGga39283928AY.1140.907788
S158R158GAgaGga38553855AY.29.10.850055
S158R158GAgaGga37803780AY.350.880914
S158R158GAgaGga36443644AY.930.995085
S158R158GAgaGga30893089AY.5.40.854732
S158R158GAgaGga30853085AY.410.90682
S158R158GAgaGga29492950AY.920.84717
S158R158GAgAGgG12950AY.920.000287
S158R158GAgaGga29242924AY.120.924147
S158R158GAgaGga28982898AY.370.915929
S158R158GAgaGga28832883AY.116.10.897851
S158R158GAgaGga28292829AY.530.813399
S158R158GAgaGga27912791AY.120.10.895987
S158R158GAgaGga27452745AY.680.751437
S158R158GAgaGga27012701AY.1160.774591
S158R158GAgaGga26212621AY.5.30.884278
S158R158GAgaGga25842584AY.1060.865372
S158R158GAgaGga25542554AY.20.909544
S158R158GAgaGga25502550AY.630.98646
S158R158GAgaGga23322332AY.23.10.973289
S158R158GAgaGga22172217AY.4.40.907119
S158R158GAgaGga21872187AY.850.934216
S158R158GAgaGga21592159AY.620.940741
S158R158GAgaGga21572157AY.240.929741
S158R158GAgaGga20762076AY.940.918991
S158R158GAgaGga20602060AY.300.815196
S158R158GAgaGga18921892AY.710.898812
S158R158GAgaGga18851885AY.1070.878378
S158R158GAgaGga18721872AY.480.870698
S158R158GAgaGga18681868AY.10.739216
S158R158GAgaGga18181818AY.120.2.10.90583
S158R158GAgaGga17931793AY.670.832405
S158R158GAgaGga17871787AY.840.781715
S158R158GAgaGga17651765AY.1010.86562
S158R158GAgaGga16821682AY.7.20.940716
S158R158GAgaGga16811681AY.380.839241
S158R158GAgaGga16541656AY.100.876524
S158R158GAgAGgC21656AY.100.00106
S158R158GAgaGga16021602AY.590.848517
S158R158GAgaGga15921592AY.80.964848
S158R158GAgaGga15251528AY.640.907738
S158R158GAgAGgG31528AY.640.001786
S158R158GAgaGga15131513AY.650.806503
S158R158GAgaGga14811481AY.320.788605
S158R158GAgaGga14741474AY.570.967192
S158R158GAgaGga14681468AY.46.20.932656
S158R158GAgaGga14641464AY.730.974052
S158R158GAgaGga14281428AY.160.542141
S158R158GAgaGga14011412AY.1050.900965
S158R158GAgAGgG111412AY.1050.007074
S158R158GAgaGga13531353AY.39.1.10.980435
S158R158GAgaGga13511352AY.900.924709
S158R158GAgAGgG11352AY.900.000684
S158R158GAgaGga12911291AY.34.10.658338
S158R158GAgaGga12761276AY.4.10.941003
S158R158GAgaGga12051205AY.1090.891272
S158R158GAgaGga11431143AY.910.834916
S158R158GAgaGga11421142AY.500.91287
S158R158GAgaGga11321133AY.860.939419
S158R158GAgAGgG11133AY.860.00083
S158R158GAgaGga10951095AY.4.30.921717
S158R158GAgaGga10951095AY.870.91174
S158R158GAgaGga996996AY.46.30.929972
S158R158GAgaGga996996AY.510.905455
S158R158GAgaGga990990AY.580.898367
S158R158GAgaGga959959AY.600.899625
S158R158GAgaGga940940AY.46.10.965092
S158R158GAgaGga911911AY.880.805482
S158R158GAgaGga892892AY.660.954011
S158R158GAgaGga881881AY.16.10.414004
S158R158GAgaGga832832AY.800.939052
S158R158GAgaGga822822AY.520.669381
S158R158GAgaGga778780AY.790.941889
S158R158GAgAGgG2780AY.790.002421
S158R158GAgaGga775775AY.400.747348
S158R158GAgaGga764764AY.990.801679
S158R158GAgaGga750750AY.1080.826902
S158R158GAgaGga748748AY.190.852908
S158R158GAgaGga716716AY.950.544901
S158R158GAgaGga705705AY.720.959184
S158R158GAgaGga701701AY.110.93842
S158R158GAgaGga684684AY.120.20.879177
S158R158GAgaGga622622AY.39.20.958398
S158R158GAgaGga610610AY.820.82768
S158R158GAgaGga607607AY.770.684329
S158R158GAgaGga574574AY.780.884438
S158R158GAgaGga572572AY.99.10.888199
S158R158GAgaGga544544AY.830.937931
S158R158GAgaGga498498AY.560.799358
S158R158GAgaGga485485AY.280.916824
S158R158GAgaGga475475AY.970.807823
S158R158GAgaGga473473AY.9.2.10.934783
S158R158GAgaGga461461AY.1040.914683
S158R158GAgaGga458458AY.810.912351
S158R158GAgaGga455455AY.210.863378
S158R158GAgaGga448448AY.220.937238
S158R158GAgaGga392392AY.150.871111
S158R158GAgaGga374374AY.5.20.921182
S158R158GAgaGga295295AY.550.270642
S158R158GAgaGga243243AY.5.10.913534
S158R158GAgaGga236236AY.91.10.95935
S158R158GAgaGga220220AY.490.702875
S158R158GAgaGga187187AY.760.903382
S158R158GAgaGga186186AY.890.911765
S158R158GAgaGga181181B.10.001658
S158R158GAgaGga163163AY.960.338174
S158R158GAgaGga112112AY.170.918033
S158R158GAgaGga111111B0.014187
S158R158GAgaGga9797B.1.617.30.289552
S158R158GAgaGga9494AY.180.949495
S158R158GAgaGga4949AY.1150.255208
S158R158GAgaGga4646AY.310.851852
S158R158GAgaGga4040B.1.1.70.000036
S158R158GAgaGga1919P.10.000299
S158R158GAgaGga1717B.1.617.10.002192
S158R158GAgaGga1515B.1.1.5190.000596
S158R158GAgaGga1515B.1.1770.000198
S158R158GAgaGga1414B.1.10.000254
S158R158GAgaGga66B.1.2140.021978
S158R158GAgaGga55B.1.1.5230.007812
S158R158GAgaGga55B.1.20.000044
S158R158GAgaGga55B.1.6230.002682
S158R158GAgaGga44A0.001548
S158R158GAgaGga44B.1.1.5260.014184
S158R158GAgaGga44B.1.4740.007605
S158R158GAgaGga44B.1.6040.068966
S158R158GAgaGga44C.36.30.002269
S158R158GAgaGga44P.1.10.001271
S158R158GAgaGga33A.2.50.001497
S158R158GAgaGga33B.1.36.80.003
S158R158GAgaGga33B.1.5760.00272
S158R158GAgaGga33B.1.6280.001057
S158R158GAgaGga33B.1.6370.000219
S158R158GAgaGga33B.4.80.214286
S158R158GAgaGga220.111111
S158R158GAgaGga22A.210.00554
S158R158GAgaGga22AU.30.004219
S158R158GAgaGga22B.1.2080.08
S158R158GAgaGga22B.1.3490.00143
S158R158GAgaGga22B.1.36.360.001204
S158R158GAgaGga22B.1.5300.014286
S158R158GAgaGga22B.1.5640.000852
S158R158GAgaGga22B.1.6000.011696
S158R158GAgaGga22B.1.6090.000959
S158R158GAgaGga22B.1.6210.000177
S158R158GAgaGga22P.1.170.000324
S158R158GAgaGga11A.2.5.20.001572
S158R158GAgaGga11AT.10.005128
S158R158GAgaGga11B.1.1.2840.000107
S158R158GAgaGga11B.1.1.2940.001266
S158R158GAgaGga11B.1.1.3180.000302
S158R158GAgaGga11B.1.1.3260.001761
S158R158GAgaGga11B.1.1.3620.005618
S158R158GAgaGga11B.1.1.500.000679
S158R158GAgaGga11B.1.1110.001175
S158R158GAgaGga11B.1.1420.002899
S158R158GAgaGga11B.1.1430.021277
S158R158GAgaGga11B.1.1570.002985
S158R158GAgaGga11B.1.177.330.001645
S158R158GAgaGga11B.1.177.430.001477
S158R158GAgaGga11B.1.177.70.000165
S158R158GAgaGga11B.1.177.730.000566
S158R158GAgaGga11B.1.2060.000816
S158R158GAgaGga11B.1.2400.000216
S158R158GAgaGga11B.1.2410.000812
S158R158GAgaGga11B.1.2430.00007
S158R158GAgaGga11B.1.3510.00003
S158R158GAgaGga11B.1.360.000146
S158R158GAgaGga11B.1.3620.001541
S158R158GAgaGga11B.1.3660.004878
S158R158GAgaGga11B.1.3970.004854
S158R158GAgaGga11B.1.4270.00005
S158R158GAgaGga11B.1.4290.000024
S158R158GAgaGga11B.1.4320.011236
S158R158GAgaGga11B.1.438.10.000107
S158R158GAgaGga11B.1.4590.004082
S158R158GAgaGga11B.1.466.20.000391
S158R158GAgaGga11B.1.4850.014925
S158R158GAgaGga11B.1.5260.000024
S158R158GAgaGga11B.1.5510.00129
S158R158GAgaGga11B.1.5770.000687
S158R158GAgaGga11B.1.5800.004065
S158R158GAgaGga11B.1.5960.000087
S158R158GAgaGga11B.1.621.10.000506
S158R158GAgaGga11B.1.6250.002353
S158R158GAgaGga11B.1.6290.013333
S158R158GAgaGga11B.1.6300.005236
S158R158GAgaGga11B.1.6310.003367
S158R158GAgaGga11B.130.045455
S158R158GAgaGga11B.400.000364
S158R158GAgaGga11C.370.000116
S158R158GAgaGga11C.37.10.002618
S158R158GAgaGga11P.1.100.000269
S158R158GAgaGga11P.1.120.000484
S158R158GAgaGga11P.1.17.10.000875
S158R158GAgaGga11P.1.40.000977
S158R158GAgaGga11P.1.70.000319
S158R158GAgaGga11P.50.013699
S158R158GAgaGga11P.70.004367
S158R158GAgaGga11Q.80.000165