CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P9L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S9P9LnonsyncCacTa295629550.99966221587-21589
S9P9LnonsyncCAcTG295610.00033829521587-21589

Details of the mutation P9L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S9P9LcCacTa29552956All0.000565
S9P9LcCAcTG12956All0
S9P9LcCacTa999999B.1.1.70.000894
S9P9LcCacTa345345B.1.4270.017422
S9P9LcCacTa218218C.1.20.92766
S9P9LcCacTa194194P.30.30941
S9P9LcCacTa183183B.1.6300.958115
S9P9LcCacTa178178AT.10.912821
S9P9LcCacTa105105C.380.846774
S9P9LcCacTa8080B.10.000733
S9P9LcCacTa4646B.1.10.000834
S9P9LcCacTa4444B.1.20.000387
S9P9LcCacTa4242B.1.1.5240.875
S9P9LcCacTa3131B.1.1770.000408
S9P9LcCacTa3030N.100.882353
S9P9LcCacTa2727C.36.3.10.07337
S9P9LcCacTa2222A.2.50.010978
S9P9LcCacTa2222B.1.5760.019946
S9P9LcCacTa2222C.390.415094
S9P9LcCacTa2020B.1.3510.000595
S9P9LcCacTa1919B.1.214.20.011391
S9P9LcCacTa1919B.1.6370.001388
S9P9LcCacTa1616B.1.177.810.003029
S9P9LcCacTa1515B.1.1490.05137
S9P9LcCacTa1212B.1.1600.000374
S9P9LcCacTa1010B.1.1.10.003267
S9P9LcCacTa1010B.1.1.330.004209
S9P9LcCacTa99B.1.1.5190.000357
S9P9LcCacTa99B.1.617.10.001161
S9P9LcCacTa99C.370.001045
S9P9LcCacTa88B.1.4290.000188
S9P9LcCacTa77AY.40.000011
S9P9LcCacTa77AY.450.000852
S9P9LcCacTa77B.1.1.2140.000388
S9P9LcCacTa77B.1.5260.000165
S9P9LcCacTa66B.1.2580.000399
S9P9LcCacTa66B.1.5880.00546
S9P9LcCacTa55B.1.258.170.00052
S9P9LcCacTa55D.20.000375
S9P9LcCacTa44B.1.1.4340.001394
S9P9LcCacTa44B.1.617.20.000015
S9P9LcCacTa44Q.80.00066
S9P9LcCacTa33AZ.2.10.02439
S9P9LcCacTa33B.1.1.280.000934
S9P9LcCacTa33B.1.1.3180.000905
S9P9LcCacTa33B.1.1.500.002037
S9P9LcCacTa33B.1.110.30.002155
S9P9LcCacTa33B.1.2340.000396
S9P9LcCacTa33B.1.2400.000647
S9P9LcCacTa33B.1.3690.000856
S9P9LcCacTa33B.1.4040.003906
S9P9LcCacTa23B.1.5250.000226
S9P9LcCAcTG13B.1.5250.000113
S9P9LcCacTa33B.1.5950.000783
S9P9LcCacTa22AD.20.000438
S9P9LcCacTa22AY.440.000012
S9P9LcCacTa22B.1.1.2070.002364
S9P9LcCacTa22B.1.1.2650.006309
S9P9LcCacTa22B.1.1.370.000386
S9P9LcCacTa22B.1.1.5250.010929
S9P9LcCacTa22B.1.177.330.003289
S9P9LcCacTa22B.1.2210.000142
S9P9LcCacTa22B.1.3110.000549
S9P9LcCacTa22B.1.36.350.005208
S9P9LcCacTa22B.1.390.007812
S9P9LcCacTa22B.1.3960.001411
S9P9LcCacTa22B.1.466.20.000782
S9P9LcCacTa22B.1.6210.000177
S9P9LcCacTa22C.10.004785
S9P9LcCacTa22C.230.011628
S9P9LcCacTa22P.20.000373
S9P9LcCacTa22P.50.027397
S9P9LcCacTa11A0.000387
S9P9LcCacTa11A.20.000662
S9P9LcCacTa11A.2.5.10.004808
S9P9LcCacTa11AU.10.001266
S9P9LcCacTa11AY.1020.000027
S9P9LcCacTa11AY.1030.000006
S9P9LcCacTa11AY.110.001339
S9P9LcCacTa11AY.130.000161
S9P9LcCacTa11AY.16.10.00047
S9P9LcCacTa11AY.23.10.000417
S9P9LcCacTa11AY.250.000006
S9P9LcCacTa11AY.30.00001
S9P9LcCacTa11AY.300.000396
S9P9LcCacTa11AY.420.00004
S9P9LcCacTa11AY.430.000004
S9P9LcCacTa11AY.530.000288
S9P9LcCacTa11AY.7.10.000113
S9P9LcCacTa11AY.750.000056
S9P9LcCacTa11AY.75.10.00018
S9P9LcCacTa11B.1.1.1760.000439
S9P9LcCacTa11B.1.1.1850.076923
S9P9LcCacTa11B.1.1.1890.001513
S9P9LcCacTa11B.1.1.1920.002309
S9P9LcCacTa11B.1.1.250.000569
S9P9LcCacTa11B.1.1.2770.000759
S9P9LcCacTa11B.1.1.3110.000358
S9P9LcCacTa11B.1.1.3170.000412
S9P9LcCacTa11B.1.1.3370.003597
S9P9LcCacTa11B.1.1.3690.000446
S9P9LcCacTa11B.1.1.3770.001381
S9P9LcCacTa11B.1.1.3970.002252
S9P9LcCacTa11B.1.1.4020.011111
S9P9LcCacTa11B.1.1.4320.001266
S9P9LcCacTa11B.1.1.440.00241
S9P9LcCacTa11B.1.1.4480.002033
S9P9LcCacTa11B.1.1.4630.0625
S9P9LcCacTa11B.1.1.480.002874
S9P9LcCacTa11B.1.1.530.013699
S9P9LcCacTa11B.1.1110.001175
S9P9LcCacTa11B.1.1280.000635
S9P9LcCacTa11B.1.177.120.000152
S9P9LcCacTa11B.1.177.210.000076
S9P9LcCacTa11B.1.177.30.007634
S9P9LcCacTa11B.1.177.40.000211
S9P9LcCacTa11B.1.177.440.000519
S9P9LcCacTa11B.1.177.570.000281
S9P9LcCacTa11B.1.177.90.001332
S9P9LcCacTa11B.1.2100.002132
S9P9LcCacTa11B.1.2390.001221
S9P9LcCacTa11B.1.2410.000812
S9P9LcCacTa11B.1.2520.006623
S9P9LcCacTa11B.1.3230.020833
S9P9LcCacTa11B.1.3240.001605
S9P9LcCacTa11B.1.3350.010309
S9P9LcCacTa11B.1.36.290.000517
S9P9LcCacTa11B.1.3610.001289
S9P9LcCacTa11B.1.3800.006623
S9P9LcCacTa11B.1.3990.001934
S9P9LcCacTa11B.1.4160.001269
S9P9LcCacTa11B.1.4330.003195
S9P9LcCacTa11B.1.4590.004082
S9P9LcCacTa11B.1.4860.111111
S9P9LcCacTa11B.1.499.10.111111
S9P9LcCacTa11B.1.5010.007353
S9P9LcCacTa11B.1.5290.055556
S9P9LcCacTa11B.1.5960.000087
S9P9LcCacTa11B.1.6090.000479
S9P9LcCacTa11B.1.6180.004032
S9P9LcCacTa11B.1.619.10.000641
S9P9LcCacTa11B.1.6230.000536
S9P9LcCacTa11B.1.930.000934
S9P9LcCacTa11B.310.003731
S9P9LcCacTa11B.40.002208
S9P9LcCacTa11B.400.000364
S9P9LcCacTa11B.60.00091
S9P9LcCacTa11C.350.000774
S9P9LcCacTa11C.40.01
S9P9LcCacTa11P.10.000016
S9P9LcCacTa11P.1.10.000318
S9P9LcCacTa11Q.10.000126
S9P9LcCacTa11Q.30.000145