CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P479T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S479P479TnonsynCctAct28250.89285722997-22999
S479P479TnonsynCcTAcC2820.071428622997-22999
S479P479TnonsynCcTAcA2810.035714322997-22999

Details of the mutation P479T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S479P479TCctAct2528All0.000005
S479P479TCcTAcC228All0
S479P479TCcTAcA128All0
S479P479TCctAct55AY.250.00003
S479P479TCctAct55AY.40.000008
S479P479TCctAct22B.1.177.600.000437
S479P479TCctAct22B.1.617.20.000008
S479P479TCctAct11AY.230.00007
S479P479TCctAct11AY.260.000028
S479P479TCctAct11AY.30.00001
S479P479TCcTAcC11AY.440.000006
S479P479TCctAct11AY.470.000031
S479P479TCctAct11AY.550.000917
S479P479TCctAct11AY.690.000187
S479P479TCcTAcA11B.1.1.5190.00004
S479P479TCctAct11B.1.1.70.000001
S479P479TCctAct11B.1.1600.000031
S479P479TCctAct11B.1.20.000009
S479P479TCctAct11B.1.3510.00003
S479P479TCctAct11B.1.3770.004566
S479P479TCcTAcC11P.1.170.000162