CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P479P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S479P479PsynccTccC2271060.4669622997-22999
S479P479PsynccTccG2271050.46255522997-22999
S479P479PsynccTccA227160.070484622997-22999

Details of the mutation P479P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S479P479PccTccC106227All0.00002
S479P479PccTccG105227All0.00002
S479P479PccTccA16227All0.000003
S479P479PccTccG2640AY.40.00004
S479P479PccTccC1440AY.40.000022
S479P479PccTccG3131AY.440.000189
S479P479PccTccC2224AY.430.000097
S479P479PccTccG224AY.430.000009
S479P479PccTccG1414AY.4.50.001505
S479P479PccTccC914B.1.1.70.000008
S479P479PccTccG314B.1.1.70.000003
S479P479PccTccA214B.1.1.70.000002
S479P479PccTccC814B.1.617.20.00003
S479P479PccTccG414B.1.617.20.000015
S479P479PccTccA214B.1.617.20.000008
S479P479PccTccC99P.10.000142
S479P479PccTccC77B.1.2580.000466
S479P479PccTccC66B.1.1600.000187
S479P479PccTccC55AY.390.000124
S479P479PccTccG55AY.90.000338
S479P479PccTccG44AY.80.002424
S479P479PccTccG34B.10.000027
S479P479PccTccC14B.10.000009
S479P479PccTccA230.111111
S479P479PccTccC130.055556
S479P479PccTccA33AY.1190.000106
S479P479PccTccG23AY.1200.000074
S479P479PccTccC13AY.1200.000037
S479P479PccTccC23B.1.20.000018
S479P479PccTccA13B.1.20.000009
S479P479PccTccC22AY.270.000129
S479P479PccTccC22AY.30.00002
S479P479PccTccG12AY.4.20.000022
S479P479PccTccC12AY.4.20.000022
S479P479PccTccA12AY.580.000907
S479P479PccTccG12AY.580.000907
S479P479PccTccC22B.1.1770.000026
S479P479PccTccG22B.1.258.170.000208
S479P479PccTccC11AY.1000.000046
S479P479PccTccA11AY.1160.000287
S479P479PccTccC11AY.1170.000085
S479P479PccTccC11AY.160.00038
S479P479PccTccG11AY.170.008197
S479P479PccTccC11AY.260.000028
S479P479PccTccA11AY.420.00004
S479P479PccTccC11B.1.10.000018
S479P479PccTccC11B.1.1.1720.018182
S479P479PccTccA11B.1.1.5070.008696
S479P479PccTccA11B.1.177.330.001645
S479P479PccTccC11B.1.177.350.000691
S479P479PccTccC11B.1.177.730.000566
S479P479PccTccG11B.1.2210.000071
S479P479PccTccG11B.1.2340.000132
S479P479PccTccC11B.1.3510.00003
S479P479PccTccG11B.1.36.360.000602
S479P479PccTccG11B.1.4090.000781
S479P479PccTccC11B.1.4290.000024
S479P479PccTccC11B.1.5960.000087
S479P479PccTccG11B.1.5990.00365
S479P479PccTccC11B.1.6230.000536
S479P479PccTccA11C.180.002591
S479P479PccTccC11D.20.000075
S479P479PccTccC11P.1.170.000162
S479P479PccTccG11Q.80.000165