CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P26P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S26P26PsynccTccC3723100.83333321638-21640
S26P26PsynccTccA372340.091397921638-21640
S26P26PsynccTccG372280.075268821638-21640

Details of the mutation P26P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S26P26PccTccC310372All0.000059
S26P26PccTccA34372All0.000007
S26P26PccTccG28372All0.000005
S26P26PccTccC5252AZ.20.042693
S26P26PccTccC3145B.1.1.70.000028
S26P26PccTccA1345B.1.1.70.000012
S26P26PccTccG145B.1.1.70.000001
S26P26PccTccC3737AY.40.000058
S26P26PccTccC3333AY.4.2.10.004917
S26P26PccTccC2728B.1.20.000238
S26P26PccTccG128B.1.20.000009
S26P26PccTccC2525AY.50.000516
S26P26PccTccC1620B.1.10.00029
S26P26PccTccG320B.1.10.000054
S26P26PccTccA120B.1.10.000018
S26P26PccTccA712B.10.000064
S26P26PccTccC412B.10.000037
S26P26PccTccG112B.10.000009
S26P26PccTccG1212B.1.6300.062827
S26P26PccTccC99B.1.1.3180.002716
S26P26PccTccC78B.1.1.5190.000278
S26P26PccTccA18B.1.1.5190.00004
S26P26PccTccC78B.1.1770.000092
S26P26PccTccA18B.1.1770.000013
S26P26PccTccC56AY.440.00003
S26P26PccTccA16AY.440.000006
S26P26PccTccC56B.1.617.20.000019
S26P26PccTccA16B.1.617.20.000004
S26P26PccTccC44AY.250.000024
S26P26PccTccC44AY.260.000113
S26P26PccTccC44B.1.177.600.000874
S26P26PccTccC44B.1.6210.000354
S26P26PccTccG34P.20.00056
S26P26PccTccC14P.20.000187
S26P26PccTccG23AY.1030.000012
S26P26PccTccC13AY.1030.000006
S26P26PccTccC23AY.430.000009
S26P26PccTccG13AY.430.000004
S26P26PccTccC33B.1.5260.000071
S26P26PccTccC22AY.1000.000092
S26P26PccTccC22AY.1180.000125
S26P26PccTccC22AY.230.000139
S26P26PccTccC22AY.30.00002
S26P26PccTccC22AY.3.10.000171
S26P26PccTccC22AY.46.40.000329
S26P26PccTccA22B.1.177.810.000379
S26P26PccTccC22B.1.2340.000264
S26P26PccTccC11AU.30.00211
S26P26PccTccG11AY.1020.000027
S26P26PccTccC11AY.1110.000183
S26P26PccTccC11AY.1190.000035
S26P26PccTccC11AY.200.000039
S26P26PccTccA11AY.4.20.000022
S26P26PccTccA11AY.4.50.000107
S26P26PccTccG11AY.420.00004
S26P26PccTccC11AY.470.000031
S26P26PccTccA11AY.710.000475
S26P26PccTccG11AY.9.20.000037
S26P26PccTccA11B.1.1.3170.000412
S26P26PccTccC11B.1.1.4120.007634
S26P26PccTccC11B.1.1.4180.022727
S26P26PccTccA11B.1.1.5230.001563
S26P26PccTccC11B.1.160.160.000929
S26P26PccTccC11B.1.2430.00007
S26P26PccTccC11B.1.258.40.003448
S26P26PccTccC11B.1.360.000146
S26P26PccTccA11B.1.4040.001302
S26P26PccTccC11B.1.4970.000315
S26P26PccTccC11B.1.5760.000907
S26P26PccTccG11B.1.5960.000087
S26P26PccTccA11B.400.000364
S26P26PccTccC11C.370.000116
S26P26PccTccC11D.20.000075