CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P139del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S139P139del1delccAcc-1150.45454521977-21979
S139P139del1delCca-ca1130.27272721977-21979
S139P139del1delCCA-NN1120.18181821977-21979
S139P139del1delCCa-Aa1110.090909121977-21979

Details of the mutation P139del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S139P139del1ccAcc-511All0.000001
S139P139del1Cca-ca311All0.000001
S139P139del1CCA-NN211All0
S139P139del1CCa-Aa111All0
S139P139del1ccAcc-35B.1.1.70.000003
S139P139del1Cca-ca15B.1.1.70.000001
S139P139del1CCA-NN15B.1.1.70.000001
S139P139del1CCa-Aa11AY.340.000097
S139P139del1CCA-NN11AY.390.000025
S139P139del1ccAcc-11AY.4.2.10.000149
S139P139del1Cca-ca11B.1.1770.000013
S139P139del1Cca-ca11B.1.5950.000261
S139P139del1ccAcc-11Q.20.000613