CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P139R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S139P139RnonsyncCacGa760.85714321977-21979
S139P139RnonsyncCAcGG710.14285721977-21979

Details of the mutation P139R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S139P139RcCacGa67All0.000001
S139P139RcCAcGG17All0
S139P139RcCacGa23AY.40.000003
S139P139RcCAcGG13AY.40.000002
S139P139RcCacGa22AY.440.000012
S139P139RcCacGa11B.1.4070.035714
S139P139RcCacGa11B.1.4290.000024