CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P1263T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1263P1263TnonsynCcaAca2442370.97131125349-25351
S1263P1263TnonsynCcAAcG24440.016393425349-25351
S1263P1263TnonsynCcAAcC24420.0081967225349-25351
S1263P1263TnonsynCcAAcT24410.0040983625349-25351

Details of the mutation P1263T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1263P1263TCcaAca237244All0.000045
S1263P1263TCcAAcG4244All0.000001
S1263P1263TCcAAcC2244All0
S1263P1263TCcAAcT1244All0
S1263P1263TCcaAca8989B.1.36.20.956989
S1263P1263TCcaAca3036B.10.000275
S1263P1263TCcAAcG436B.10.000037
S1263P1263TCcAAcC236B.10.000018
S1263P1263TCcaAca3333B.1.177.40.006965
S1263P1263TCcaAca1718B.1.1.70.000015
S1263P1263TCcAAcT118B.1.1.70.000001
S1263P1263TCcaAca1717AY.440.000103
S1263P1263TCcaAca77AY.40.000011
S1263P1263TCcaAca66B.1.617.20.000023
S1263P1263TCcaAca55B.1.1770.000066
S1263P1263TCcaAca44AY.430.000018
S1263P1263TCcaAca33B.1.177.530.007177
S1263P1263TCcaAca33C.370.000348
S1263P1263TCcaAca22B.1.10.000036
S1263P1263TCcaAca22B.1.2210.000142
S1263P1263TCcaAca11AY.1020.000027
S1263P1263TCcaAca11AY.1030.000006
S1263P1263TCcaAca11AY.1100.000113
S1263P1263TCcaAca11AY.1180.000063
S1263P1263TCcaAca11AY.250.000006
S1263P1263TCcaAca11AY.290.000016
S1263P1263TCcaAca11AY.30.00001
S1263P1263TCcaAca11AY.3.10.000085
S1263P1263TCcaAca11AY.4.20.000022
S1263P1263TCcaAca11AY.4.40.000409
S1263P1263TCcaAca11AY.610.000105
S1263P1263TCcaAca11AY.680.000274
S1263P1263TCcaAca11AY.770.001127
S1263P1263TCcaAca11B.1.1.4090.002833
S1263P1263TCcaAca11B.1.177.730.000566
S1263P1263TCcaAca11B.1.2220.001692
S1263P1263TCcaAca11B.1.3510.00003
S1263P1263TCcaAca11B.1.4680.005714
S1263P1263TCcaAca11B.60.00091