CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P1263S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1263P1263SnonsynCcaTca6186110.98867325349-25351
S1263P1263SnonsynCcATcT61830.0048543725349-25351
S1263P1263SnonsynCcATcC61820.0032362525349-25351
S1263P1263SnonsynCCAAGC61810.0016181225349-25351
S1263P1263SnonsynCcATcG61810.0016181225349-25351

Details of the mutation P1263S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1263P1263SCcaTca611618All0.000117
S1263P1263SCcATcT3618All0.000001
S1263P1263SCcATcC2618All0
S1263P1263SCcATcG1618All0
S1263P1263SCCAAGC1618All0
S1263P1263SCcaTca130130AY.440.000791
S1263P1263SCcaTca9292B.1.1.70.000082
S1263P1263SCcaTca9090AY.1180.005638
S1263P1263SCcaTca4545AY.470.0014
S1263P1263SCcaTca4040AY.30.000398
S1263P1263SCcaTca3030AY.40.000047
S1263P1263SCcaTca2125B.10.000192
S1263P1263SCcATcC225B.10.000018
S1263P1263SCCAAGC125B.10.000009
S1263P1263SCcATcG125B.10.000009
S1263P1263SCcaTca1515B.1.20.000132
S1263P1263SCcaTca1315B.1.617.20.000049
S1263P1263SCcATcT215B.1.617.20.000008
S1263P1263SCcaTca1111AY.430.000049
S1263P1263SCcaTca99AY.1000.000414
S1263P1263SCcaTca99B.1.1770.000119
S1263P1263SCcaTca88AY.98.10.000387
S1263P1263SCcaTca66AY.200.000233
S1263P1263SCcaTca66B0.000767
S1263P1263SCcaTca66P.20.00112
S1263P1263SCcaTca55AY.1030.000031
S1263P1263SCcaTca55AY.250.00003
S1263P1263SCcaTca55AY.5.40.001384
S1263P1263SCcaTca44B.1.10.000073
S1263P1263SCcaTca44B.1.177.80.00301
S1263P1263SCcaTca330.166667
S1263P1263SCcaTca33AY.1020.00008
S1263P1263SCcaTca33AY.4.20.000065
S1263P1263SCcaTca33B.1.1.2940.003797
S1263P1263SCcaTca33B.1.177.200.004552
S1263P1263SCcaTca33B.1.617.10.000387
S1263P1263SCcaTca22AY.360.000296
S1263P1263SCcaTca22AY.450.000243
S1263P1263SCcaTca22AY.46.50.000397
S1263P1263SCcaTca22AY.50.000041
S1263P1263SCcaTca22B.1.2210.000142
S1263P1263SCcaTca12B.1.2220.001692
S1263P1263SCcATcT12B.1.2220.001692
S1263P1263SCcaTca22B.1.258.170.000208
S1263P1263SCcaTca22B.1.3510.000059
S1263P1263SCcaTca22P.10.000032
S1263P1263SCcaTca22P.30.00319
S1263P1263SCcaTca11AY.420.00004
S1263P1263SCcaTca11AY.60.000041
S1263P1263SCcaTca11AY.600.000938
S1263P1263SCcaTca11AY.740.000116
S1263P1263SCcaTca11AY.750.000056
S1263P1263SCcaTca11AY.9.20.000037
S1263P1263SCcaTca11AY.910.00073
S1263P1263SCcaTca11B.1.1.30.008696
S1263P1263SCcaTca11B.1.1.4090.002833
S1263P1263SCcaTca11B.1.1.4860.001577
S1263P1263SCcaTca11B.1.1.700.000341
S1263P1263SCcaTca11B.1.177.730.000566
S1263P1263SCcaTca11B.1.2580.000067
S1263P1263SCcaTca11B.1.360.000146
S1263P1263SCcaTca11B.1.36.20.010753
S1263P1263SCcaTca11B.1.36.310.001751
S1263P1263SCcaTca11B.1.4970.000315
S1263P1263SCcaTca11B.1.6090.000479
S1263P1263SCcaTca11B.1.621.10.000506
S1263P1263SCcaTca11B.1.6270.00202