CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P1140del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1140P1140del1delccTcc-13100.76923124980-24982
S1140P1140del1delCct-ct1320.15384624980-24982
S1140P1140del1delCcT-cG1310.076923124980-24982

Details of the mutation P1140del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1140P1140del1ccTcc-1013All0.000002
S1140P1140del1Cct-ct213All0
S1140P1140del1CcT-cG113All0
S1140P1140del1ccTcc-22B.1.10.000036
S1140P1140del1CcT-cG12B.1.617.20.000004
S1140P1140del1ccTcc-12B.1.617.20.000004
S1140P1140del1Cct-ct22B.1.6270.00404
S1140P1140del1ccTcc-11AY.710.000475
S1140P1140del1ccTcc-11B.10.000009
S1140P1140del1ccTcc-11B.1.1.70.000001
S1140P1140del1ccTcc-11B.1.1700.00431
S1140P1140del1ccTcc-11B.1.1770.000013
S1140P1140del1ccTcc-11B.1.20.000009
S1140P1140del1ccTcc-11B.1.5760.000907