CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P1140T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1140P1140TnonsynCctAct15130.86666724980-24982
S1140P1140TnonsynCcTAcC1510.066666724980-24982
S1140P1140TnonsynCcTAcA1510.066666724980-24982

Details of the mutation P1140T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1140P1140TCctAct1315All0.000002
S1140P1140TCcTAcC115All0
S1140P1140TCcTAcA115All0
S1140P1140TCctAct1111AY.250.000066
S1140P1140TCctAct120.055556
S1140P1140TCcTAcA120.055556
S1140P1140TCcTAcC12B.1.2210.000071
S1140P1140TCctAct12B.1.2210.000071