CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = P1140P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1140P1140PsynccTccC166513490.8102124980-24982
S1140P1140PsynccTccG16652760.16576624980-24982
S1140P1140PsynccTccA1665400.02402424980-24982

Details of the mutation P1140P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1140P1140PccTccC13491665All0.000258
S1140P1140PccTccG2761665All0.000053
S1140P1140PccTccA401665All0.000008
S1140P1140PccTccC988988B.10.00905
S1140P1140PccTccG203215B.1.617.20.000764
S1140P1140PccTccC9215B.1.617.20.000034
S1140P1140PccTccA3215B.1.617.20.000011
S1140P1140PccTccC6363B.1.5690.913043
S1140P1140PccTccC6161B.1.5210.303483
S1140P1140PccTccG4343AY.980.003397
S1140P1140PccTccC2831AY.40.000044
S1140P1140PccTccA231AY.40.000003
S1140P1140PccTccG131AY.40.000002
S1140P1140PccTccC2026B.1.1.70.000018
S1140P1140PccTccG426B.1.1.70.000004
S1140P1140PccTccA226B.1.1.70.000002
S1140P1140PccTccC1919B.1.20.000167
S1140P1140PccTccC1219B.1.5260.000282
S1140P1140PccTccA719B.1.5260.000165
S1140P1140PccTccA1111AY.4.20.000239
S1140P1140PccTccC910AY.1030.000056
S1140P1140PccTccA110AY.1030.000006
S1140P1140PccTccC1010AY.260.000283
S1140P1140PccTccG710AY.30.00007
S1140P1140PccTccC310AY.30.00003
S1140P1140PccTccC810AY.440.000049
S1140P1140PccTccG210AY.440.000012
S1140P1140PccTccC99B.1.760.102273
S1140P1140PccTccC88AY.270.000518
S1140P1140PccTccC66AE.80.002934
S1140P1140PccTccA36AY.1020.00008
S1140P1140PccTccC36AY.1020.00008
S1140P1140PccTccC56B.1.10.000091
S1140P1140PccTccG16B.1.10.000018
S1140P1140PccTccG55B.1.360.00073
S1140P1140PccTccC55B.1.438.10.000536
S1140P1140PccTccC44AY.250.000024
S1140P1140PccTccG34AY.320.001597
S1140P1140PccTccA14AY.320.000532
S1140P1140PccTccC44B.1.1770.000053
S1140P1140PccTccC44B.1.4290.000094
S1140P1140PccTccC44B.1.9.50.022727
S1140P1140PccTccA330.166667
S1140P1140PccTccC23AY.430.000009
S1140P1140PccTccA13AY.430.000004
S1140P1140PccTccC33AY.540.000286
S1140P1140PccTccC33B.1.2840.039474
S1140P1140PccTccC33B.1.6210.000266
S1140P1140PccTccC22AY.1000.000092
S1140P1140PccTccA22AY.1180.000125
S1140P1140PccTccC22AY.450.000243
S1140P1140PccTccC12AY.50.000021
S1140P1140PccTccG12AY.50.000021
S1140P1140PccTccC22AY.99.20.000184
S1140P1140PccTccG22B.1.1.1740.006757
S1140P1140PccTccA22B.1.1.3060.000877
S1140P1140PccTccG22B.1.177.810.000379
S1140P1140PccTccC22B.1.2430.000139
S1140P1140PccTccC22B.1.36.80.002
S1140P1140PccTccC22B.1.3960.001411
S1140P1140PccTccG12B.30.000831
S1140P1140PccTccC12B.30.000831
S1140P1140PccTccC22D.20.00015
S1140P1140PccTccC22P.10.000032
S1140P1140PccTccC11A.20.000662
S1140P1140PccTccC11AY.1050.000643
S1140P1140PccTccC11AY.1170.000085
S1140P1140PccTccC11AY.1190.000035
S1140P1140PccTccC11AY.120.000316
S1140P1140PccTccC11AY.1200.000037
S1140P1140PccTccC11AY.200.000039
S1140P1140PccTccA11AY.230.00007
S1140P1140PccTccC11AY.290.000016
S1140P1140PccTccG11AY.390.000025
S1140P1140PccTccC11AY.39.10.00004
S1140P1140PccTccC11AY.39.1.10.000725
S1140P1140PccTccC11AY.740.000116
S1140P1140PccTccC11AY.9.10.000084
S1140P1140PccTccC11B0.000128
S1140P1140PccTccC11B.1.1.10.000327
S1140P1140PccTccC11B.1.1.1230.017857
S1140P1140PccTccC11B.1.1.1940.00495
S1140P1140PccTccC11B.1.1.2220.000204
S1140P1140PccTccA11B.1.1600.000031
S1140P1140PccTccC11B.1.177.560.000668
S1140P1140PccTccC11B.1.2060.000816
S1140P1140PccTccC11B.1.2210.000071
S1140P1140PccTccC11B.1.2980.002114
S1140P1140PccTccC11B.1.3110.000275
S1140P1140PccTccC11B.1.3240.001605
S1140P1140PccTccC11B.1.3610.001289
S1140P1140PccTccC11B.1.3670.000792
S1140P1140PccTccC11B.1.3700.008
S1140P1140PccTccC11B.1.3770.004566
S1140P1140PccTccC11B.1.4130.004255
S1140P1140PccTccC11B.1.4380.006536
S1140P1140PccTccC11B.1.4520.013699
S1140P1140PccTccC11B.1.4590.004082
S1140P1140PccTccC11B.1.5010.007353
S1140P1140PccTccC11B.1.5750.000303
S1140P1140PccTccC11B.1.5770.000687
S1140P1140PccTccC11B.1.88.10.004808
S1140P1140PccTccC11B.1.940.027027
S1140P1140PccTccC11N.40.004255
S1140P1140PccTccC11P.1.160.000374