CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N709S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S709N709SnonsynaAtaGt1161080.93103523687-23689
S709N709SnonsynaATaGC11630.025862123687-23689
S709N709SnonsynAAtTCt11630.025862123687-23689
S709N709SnonsynAATTCA11620.017241423687-23689

Details of the mutation N709S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S709N709SaAtaGt108116All0.000021
S709N709SAAtTCt3116All0.000001
S709N709SaATaGC3116All0.000001
S709N709SAATTCA2116All0
S709N709SaAtaGt3636AY.1030.000224
S709N709SaAtaGt1010B.1.617.20.000038
S709N709SaAtaGt88AY.250.000048
S709N709SaAtaGt57B.1.1.70.000004
S709N709SAAtTCt27B.1.1.70.000002
S709N709SaAtaGt66AY.40.000009
S709N709SaAtaGt56AY.430.000022
S709N709SaATaGC16AY.430.000004
S709N709SAATTCA240.111111
S709N709SaATaGC240.111111
S709N709SaAtaGt33A.2.5.20.004717
S709N709SaAtaGt33AY.30.00003
S709N709SaAtaGt33AY.330.0002
S709N709SaAtaGt33B.1.1.5190.000119
S709N709SaAtaGt33C.370.000348
S709N709SaAtaGt22AY.200.000078
S709N709SaAtaGt22AY.850.000854
S709N709SaAtaGt22B.1.20.000018
S709N709SaAtaGt22B.1.4290.000047
S709N709SaAtaGt11AY.1020.000027
S709N709SaAtaGt11AY.16.10.00047
S709N709SaAtaGt11AY.230.00007
S709N709SaAtaGt11AY.39.10.00004
S709N709SaAtaGt11AY.440.000006
S709N709SaAtaGt11AY.5.40.000277
S709N709SaAtaGt11AY.840.000437
S709N709SaAtaGt11AY.9.20.000037
S709N709SaAtaGt11AY.980.000079
S709N709SAAtTCt11B.1.10.000018
S709N709SaAtaGt11B.1.1770.000013
S709N709SaAtaGt11B.1.258.170.000104
S709N709SaAtaGt11B.1.5960.000087
S709N709SaAtaGt11D.20.000075
S709N709SaAtaGt11P.10.000016
S709N709SaAtaGt11Q.40.000455