CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N658D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S658N658DnonsynAacGac3002980.99333323534-23536
S658N658DnonsynAaCGaT30020.0066666723534-23536

Details of the mutation N658D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S658N658DAacGac298300All0.000057
S658N658DAaCGaT2300All0
S658N658DAacGac105105B.1.177.600.022936
S658N658DAacGac2626B.1.617.20.000098
S658N658DAacGac2121AY.40.000033
S658N658DAacGac1515B.1.1.4480.030488
S658N658DAacGac1010B.1.1.250.005685
S658N658DAacGac1010B.1.177.810.001893
S658N658DAacGac1010B.1.4290.000235
S658N658DAacGac99B.1.2030.5625
S658N658DAacGac88B.1.10.000145
S658N658DAacGac88P.10.000126
S658N658DAacGac77B.10.000064
S658N658DAacGac77B.1.6280.002467
S658N658DAacGac66B.1.1.70.000005
S658N658DAacGac66B.1.20.000053
S658N658DAacGac55AY.1140.001156
S658N658DAacGac55AY.250.00003
S658N658DAacGac55B.1.1770.000066
S658N658DAacGac33AY.1030.000019
S658N658DAacGac33AY.960.006224
S658N658DAaCGaT220.111111
S658N658DAacGac22AY.1180.000125
S658N658DAacGac22AY.4.20.000043
S658N658DAacGac22AY.430.000009
S658N658DAacGac22B.1.160.280.005848
S658N658DAacGac22Q.40.00091
S658N658DAacGac11A0.000387
S658N658DAacGac11AY.1020.000027
S658N658DAacGac11AY.1170.000085
S658N658DAacGac11AY.1200.000037
S658N658DAacGac11AY.260.000028
S658N658DAacGac11AY.390.000025
S658N658DAacGac11AY.4.40.000409
S658N658DAacGac11AY.670.000464
S658N658DAacGac11AY.770.001127
S658N658DAacGac11AY.920.000287
S658N658DAacGac11AY.980.000079
S658N658DAacGac11B.1.1.4420.018519
S658N658DAacGac11B.1.1.5190.00004
S658N658DAacGac11B.1.177.730.000566
S658N658DAacGac11B.1.36.290.000517
S658N658DAacGac11B.1.4080.00369
S658N658DAacGac11C.10.002392
S658N658DAacGac11P.1.120.000484
S658N658DAacGac11U.20.008772