CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N501del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S501N501del1delaaTaa-25180.7223063-23065
S501N501del1delAat-at2560.2423063-23065
S501N501del1delAaTGa-2510.0423063-23065

Details of the mutation N501del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S501N501del1aaTaa-1825All0.000003
S501N501del1Aat-at625All0.000001
S501N501del1AaTGa-125All0
S501N501del1aaTaa-55AY.430.000022
S501N501del1aaTaa-44AY.40.000006
S501N501del1aaTaa-23AY.9.20.000073
S501N501del1Aat-at13AY.9.20.000037
S501N501del1aaTaa-23B.1.617.20.000008
S501N501del1AaTGa-13B.1.617.20.000004
S501N501del1Aat-at22B.1.6270.00404
S501N501del1aaTaa-11AY.1030.000006
S501N501del1aaTaa-11AY.1200.000037
S501N501del1aaTaa-11AY.30.00001
S501N501del1aaTaa-11AY.420.00004
S501N501del1aaTaa-11AY.46.60.000072
S501N501del1Aat-at11AY.700.000209
S501N501del1Aat-at11B.10.000009
S501N501del1Aat-at11B.1.20.000009