CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N501Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S501N501YnonsynAatTat129297412928780.99992623063-23065
S501N501YnonsynAaTTaC1292974960.000074247423063-23065

Details of the mutation N501Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S501N501YAatTat12928781292974All0.247278
S501N501YAaTTaC961292974All0.000018
S501N501YAatTat10935921093681B.1.1.70.979009
S501N501YAaTTaC891093681B.1.1.70.00008
S501N501YAatTat6066360663P.10.955684
S501N501YAatTat2938629386B.1.3510.873543
S501N501YAatTat2052820528P.1.140.981262
S501N501YAatTat1072610726B.1.6210.949456
S501N501YAatTat78497850Q.10.991536
S501N501YAaTTaC17850Q.10.000126
S501N501YAatTat67946794Q.30.985352
S501N501YAatTat58325833Q.80.961741
S501N501YAaTTaC15833Q.80.000165
S501N501YAatTat57885788P.1.170.936267
S501N501YAatTat43184318B.10.039551
S501N501YAatTat41024102P.1.150.953067
S501N501YAatTat35143514P.1.100.946915
S501N501YAatTat29672967P.1.70.947318
S501N501YAatTat29182918P.1.10.926938
S501N501YAatTat29162916B.1.351.20.8823
S501N501YAatTat27452745B.1.10.049797
S501N501YAatTat25652567P.1.160.959596
S501N501YAaTTaC22567P.1.160.000748
S501N501YAatTat21482148Q.40.976808
S501N501YAatTat19391939B.1.621.10.980779
S501N501YAatTat17131713B.1.6230.918991
S501N501YAatTat16301630P.1.120.788964
S501N501YAatTat16281628Q.20.998773
S501N501YAatTat15671567B.1.351.50.939448
S501N501YAatTat14911491B.1.20.013129
S501N501YAatTat11411141P.1.17.10.99825
S501N501YAatTat10451045B.1.351.30.915863
S501N501YAatTat10451045P.1.130.938904
S501N501YAatTat10131013P.1.40.989258
S501N501YAatTat889889Q.70.987778
S501N501YAatTat828828P.1.20.957225
S501N501YAatTat653653AP.10.98048
S501N501YAatTat598598A.270.990066
S501N501YAatTat550553P.30.877193
S501N501YAaTTaC3553P.30.004785
S501N501YAatTat513513P.1.60.998054
S501N501YAatTat250250B.1.617.20.000941
S501N501YAatTat203203C.1.20.86383
S501N501YAatTat201201P.1.90.966346
S501N501YAatTat198198P.1.80.947368
S501N501YAatTat196196AY.430.000868
S501N501YAatTat184184B.1.1.1890.278366
S501N501YAatTat182182A.290.968085
S501N501YAatTat167167B.1.3750.136885
S501N501YAatTat150150Q.60.993377
S501N501YAatTat132132B.1.177.730.074745
S501N501YAatTat123123P.1.10.11
S501N501YAatTat115115B.1.1770.001514
S501N501YAatTat104104B.1.5760.094288
S501N501YAatTat9999AY.40.000154
S501N501YAatTat9999B.1.5960.008627
S501N501YAatTat9494P.1.110.959184
S501N501YAatTat7373B.1.5260.001716
S501N501YAatTat7171AY.50.001466
S501N501YAatTat6969B.1.2210.004901
S501N501YAatTat6767B.1.1.2050.249071
S501N501YAatTat6262B.1.5540.273128
S501N501YAatTat5757AY.1160.016346
S501N501YAatTat5757B0.007285
S501N501YAatTat5656AY.680.01533
S501N501YAatTat5656Q.50.949153
S501N501YAatTat5252AY.440.000317
S501N501YAatTat5252AY.980.004108
S501N501YAatTat5252B.1.1600.001622
S501N501YAatTat4949B.1.1.4090.13881
S501N501YAatTat4848B.1.6040.827586
S501N501YAatTat4747B.1.1700.202586
S501N501YAatTat4545XA1
S501N501YAatTat4444B.1.1.1360.93617
S501N501YAatTat4242B.1.5970.194444
S501N501YAatTat4141B.1.1.5280.197115
S501N501YAatTat3737B.1.4800.09204
S501N501YAatTat3636B.1.1260.045918
S501N501YAatTat3636B.1.6090.017258
S501N501YAatTat3131B.1.1.280.009648
S501N501YAatTat3131B.1.177.70.00511
S501N501YAatTat3131B.1.4290.000729
S501N501YAatTat3030B.1.1.5070.26087
S501N501YAatTat3030B.1.3240.048154
S501N501YAatTat2929P.1.31
S501N501YAatTat2828B.1.1.1610.09894
S501N501YAatTat2828B.1.1.5190.001112
S501N501YAatTat2828B.1.3110.007688
S501N501YAatTat2828C.370.00325
S501N501YAatTat2727B.1.1.3120.051625
S501N501YAatTat2424B.1.214.20.014388
S501N501YAatTat2323B.1.2430.0016
S501N501YAatTat2323B.1.5300.164286
S501N501YAatTat2323C.36.3.10.0625
S501N501YAatTat2323P.1.10.20.958333
S501N501YAatTat2222A0.008514
S501N501YAatTat2222AY.46.60.001589
S501N501YAatTat2222B.1.596.10.205607
S501N501YAatTat2121AY.16.10.009868
S501N501YAatTat2121AY.46.20.013342
S501N501YAatTat2121B.1.36.310.036778
S501N501YAatTat2020B.1.1.3060.008768
S501N501YAatTat2020B.1.5240.028129
S501N501YAatTat2020B.1.6360.134228
S501N501YAatTat1919AY.1030.000118
S501N501YAatTat1919AY.420.000764
S501N501YAatTat1919B.1.1.2200.035316
S501N501YAatTat1919B.1.258.170.001975
S501N501YAatTat1919B.1.4270.000959
S501N501YAatTat1717B.1.177.860.003119
S501N501YAatTat1717B.1.6370.001242
S501N501YAatTat1515AY.1020.000398
S501N501YAatTat1414AY.390.000346
S501N501YAatTat1414B.1.5250.001584
S501N501YAatTat1414B.1.5950.003653
S501N501YAatTat1414B.1.6200.013245
S501N501YAatTat1414C.390.264151
S501N501YAatTat1313AY.950.009893
S501N501YAatTat1313B.1.3670.010301
S501N501YAatTat1313P.1.51
S501N501YAatTat1212A.2.50.005988
S501N501YAatTat1212B.1.2580.000799
S501N501YAatTat1212B.1.4700.016854
S501N501YAatTat1111AY.1200.000409
S501N501YAatTat1111AY.610.001153
S501N501YAatTat1111B.1.1.390.005607
S501N501YAatTat1111B.1.351.10.423077
S501N501YAatTat1111B.1.3990.021277
S501N501YAatTat1111B.1.5740.023656
S501N501YAatTat1010AY.250.00006
S501N501YAatTat1010AY.9.20.000367
S501N501YAatTat99AY.1130.001282
S501N501YAatTat99B.1.5330.086538
S501N501YAatTat99B.1.6320.060403
S501N501YAatTat88AY.330.000534
S501N501YAatTat88B.1.1.500.005431
S501N501YAatTat88B.1.360.001167
S501N501YAatTat88B.1.36.10.009122
S501N501YAatTat88B.1.3690.002282
S501N501YAatTat88B.1.6190.006969
S501N501YAatTat88C.36.30.004538
S501N501YAatTat77AY.1170.000592
S501N501YAatTat77AY.230.000488
S501N501YAatTat77AY.710.003325
S501N501YAatTat77AY.98.10.000339
S501N501YAatTat77B.1.1.3170.002882
S501N501YAatTat77B.1.5800.028455
S501N501YAatTat660.333333
S501N501YAatTat66AY.200.000233
S501N501YAatTat66AY.75.10.001082
S501N501YAatTat66B.1.1.100.006689
S501N501YAatTat66B.1.1.2940.007595
S501N501YAatTat66B.1.1.3720.004132
S501N501YAatTat66B.1.177.310.068966
S501N501YAatTat66B.1.438.10.000644
S501N501YAatTat66B.1.6050.035714
S501N501YAatTat66B.1.80.011834
S501N501YAatTat66R.10.00054
S501N501YAatTat55AY.10.001979
S501N501YAatTat55AY.360.000741
S501N501YAatTat55AY.700.001043
S501N501YAatTat55B.1.1.10.001633
S501N501YAatTat55B.1.1.3700.063291
S501N501YAatTat55B.1.1.5230.007812
S501N501YAatTat55B.1.1.5250.027322
S501N501YAatTat55B.1.1.990.119048
S501N501YAatTat55B.1.1390.003666
S501N501YAatTat55B.1.1570.014925
S501N501YAatTat55B.1.2400.001078
S501N501YAatTat55B.1.3490.003574
S501N501YAatTat55B.1.4110.018519
S501N501YAatTat55B.1.4860.555556
S501N501YAatTat55B.1.5990.018248
S501N501YAatTat55B.1.617.10.000645
S501N501YAatTat55B.1.6280.001762
S501N501YAatTat55B.1.6340.017123
S501N501YAatTat44AY.260.000113
S501N501YAatTat44AY.30.00004
S501N501YAatTat44AY.450.000487
S501N501YAatTat44B.1.1.3890.024242
S501N501YAatTat44B.1.1.4130.027586
S501N501YAatTat44B.1.1.4320.005063
S501N501YAatTat44B.1.2140.014652
S501N501YAatTat44B.1.5750.001214
S501N501YAatTat44C.160.004242
S501N501YAatTat44C.350.003096
S501N501YAatTat44P.50.054795
S501N501YAatTat33A.20.001985
S501N501YAatTat33A.230.031579
S501N501YAatTat33AV.10.015152
S501N501YAatTat33AY.120.20.003856
S501N501YAatTat33AY.290.000047
S501N501YAatTat33AY.300.001187
S501N501YAatTat33B.1.1.1480.026316
S501N501YAatTat33B.1.1.3180.000905
S501N501YAatTat33B.1.1.5240.0625
S501N501YAatTat33B.1.1.700.001023
S501N501YAatTat33B.1.177.500.014085
S501N501YAatTat33B.1.177.790.007026
S501N501YAatTat33B.1.3300.085714
S501N501YAatTat33B.1.36.70.012
S501N501YAatTat33B.1.4160.003807
S501N501YAatTat33B.1.4170.085714
S501N501YAatTat33B.1.5640.001278
S501N501YAatTat33B.550.00885
S501N501YAatTat33N.50.0053
S501N501YAatTat22A.10.000564
S501N501YAatTat22A.2.5.20.003145
S501N501YAatTat22AT.10.010256
S501N501YAatTat22AU.20.004843
S501N501YAatTat22AY.1000.000092
S501N501YAatTat22AY.1050.001286
S501N501YAatTat22AY.120.2.10.000997
S501N501YAatTat22AY.1210.000271
S501N501YAatTat22AY.34.10.00102
S501N501YAatTat22AY.350.000466
S501N501YAatTat22AY.410.000588
S501N501YAatTat22AY.460.000208
S501N501YAatTat22AY.46.40.000329
S501N501YAatTat22AY.5.40.000553
S501N501YAatTat22AY.530.000575
S501N501YAatTat22AY.590.001059
S501N501YAatTat22AY.60.000082
S501N501YAatTat22AY.670.000929
S501N501YAatTat22AY.7.20.001119
S501N501YAatTat22AY.750.000112
S501N501YAatTat22AY.780.003082
S501N501YAatTat22AY.840.000875
S501N501YAatTat22AY.9.10.000167
S501N501YAatTat22AY.99.20.000184
S501N501YAatTat22AZ.30.00304
S501N501YAatTat22B.1.1.1410.004024
S501N501YAatTat22B.1.1.1420.035088
S501N501YAatTat22B.1.1.1710.007353
S501N501YAatTat22B.1.1.2160.001781
S501N501YAatTat22B.1.1.2360.013793
S501N501YAatTat22B.1.1.2410.004141
S501N501YAatTat22B.1.1.250.001137
S501N501YAatTat22B.1.1.2540.022472
S501N501YAatTat22B.1.1.2770.001517
S501N501YAatTat22B.1.1.2910.001485
S501N501YAatTat22B.1.1.2990.02439
S501N501YAatTat22B.1.1.3430.041667
S501N501YAatTat22B.1.1.370.000386
S501N501YAatTat22B.1.1.3750.02381
S501N501YAatTat22B.1.1.4020.022222
S501N501YAatTat22B.1.1.440.004819
S501N501YAatTat22B.1.1.4640.002946
S501N501YAatTat22B.1.1.540.006042
S501N501YAatTat22B.1.1.830.00542
S501N501YAatTat22B.1.110.30.001437
S501N501YAatTat22B.1.177.210.000153
S501N501YAatTat22B.1.177.40.000422
S501N501YAatTat22B.1.177.420.001789
S501N501YAatTat22B.1.177.810.000379
S501N501YAatTat22B.1.177.820.000955
S501N501YAatTat22B.1.214.30.014286
S501N501YAatTat22B.1.2340.000264
S501N501YAatTat22B.1.2410.001623
S501N501YAatTat22B.1.258.140.001961
S501N501YAatTat22B.1.3200.002491
S501N501YAatTat22B.1.3610.002577
S501N501YAatTat22B.1.3800.013245
S501N501YAatTat22B.1.4590.008163
S501N501YAatTat22B.1.466.20.000782
S501N501YAatTat22B.1.5170.000854
S501N501YAatTat22B.1.5770.001375
S501N501YAatTat22B.1.6270.00404
S501N501YAatTat22B.1.6330.083333
S501N501YAatTat22B.1.6380.105263
S501N501YAatTat22C.10.004785
S501N501YAatTat22C.360.001821
S501N501YAatTat22C.37.10.005236
S501N501YAatTat22P.20.000373
S501N501YAatTat11A.23.10.000704
S501N501YAatTat11A.300.142857
S501N501YAatTat11AA.70.009174
S501N501YAatTat11AD.10.004115
S501N501YAatTat11AD.20.000219
S501N501YAatTat11AH.30.003802
S501N501YAatTat11AS.20.015625
S501N501YAatTat11AY.1060.000335
S501N501YAatTat11AY.1090.00074
S501N501YAatTat11AY.1100.000113
S501N501YAatTat11AY.1190.000035
S501N501YAatTat11AY.140.000088
S501N501YAatTat11AY.190.00114
S501N501YAatTat11AY.20.000356
S501N501YAatTat11AY.210.001898
S501N501YAatTat11AY.240.000431
S501N501YAatTat11AY.39.10.00004
S501N501YAatTat11AY.4.20.000022
S501N501YAatTat11AY.4.40.000409
S501N501YAatTat11AY.400.000964
S501N501YAatTat11AY.470.000031
S501N501YAatTat11AY.520.000814
S501N501YAatTat11AY.550.000917
S501N501YAatTat11AY.600.000938
S501N501YAatTat11AY.620.000436
S501N501YAatTat11AY.730.000665
S501N501YAatTat11AY.760.004831
S501N501YAatTat11AY.90.000068
S501N501YAatTat11AZ.20.000821
S501N501YAatTat11B.1.1.1170.009709
S501N501YAatTat11B.1.1.130.035714
S501N501YAatTat11B.1.1.1350.004695
S501N501YAatTat11B.1.1.1600.02381
S501N501YAatTat11B.1.1.1870.00885
S501N501YAatTat11B.1.1.1980.001468
S501N501YAatTat11B.1.1.2070.001182
S501N501YAatTat11B.1.1.2210.010101
S501N501YAatTat11B.1.1.2220.000204
S501N501YAatTat11B.1.1.2290.005747
S501N501YAatTat11B.1.1.2310.003096
S501N501YAatTat11B.1.1.2320.001815
S501N501YAatTat11B.1.1.2370.005405
S501N501YAatTat11B.1.1.2650.003155
S501N501YAatTat11B.1.1.2690.001353
S501N501YAatTat11B.1.1.3020.002075
S501N501YAatTat11B.1.1.3110.000358
S501N501YAatTat11B.1.1.3270.1
S501N501YAatTat11B.1.1.3280.016949
S501N501YAatTat11B.1.1.340.013158
S501N501YAatTat11B.1.1.3480.000796
S501N501YAatTat11B.1.1.3670.055556
S501N501YAatTat11B.1.1.3740.002375
S501N501YAatTat11B.1.1.4190.007407
S501N501YAatTat11B.1.1.4480.002033
S501N501YAatTat11B.1.1.4620.008621
S501N501YAatTat11B.1.1.5210.005348
S501N501YAatTat11B.1.1.5260.003546
S501N501YAatTat11B.1.1.550.012987
S501N501YAatTat11B.1.1.560.017857
S501N501YAatTat11B.1.1.630.000386
S501N501YAatTat11B.1.1.890.006061
S501N501YAatTat11B.1.1040.00369
S501N501YAatTat11B.1.160.160.000929
S501N501YAatTat11B.1.160.330.004425
S501N501YAatTat11B.1.177.150.000631
S501N501YAatTat11B.1.177.190.001431
S501N501YAatTat11B.1.177.320.00135
S501N501YAatTat11B.1.177.440.000519
S501N501YAatTat11B.1.177.510.004566
S501N501YAatTat11B.1.177.540.000606
S501N501YAatTat11B.1.177.560.000668
S501N501YAatTat11B.1.177.580.001332
S501N501YAatTat11B.1.177.600.000218
S501N501YAatTat11B.1.177.800.001912
S501N501YAatTat11B.1.177.870.000728
S501N501YAatTat11B.1.1790.003759
S501N501YAatTat11B.1.2060.000816
S501N501YAatTat11B.1.2120.016667
S501N501YAatTat11B.1.2390.001221
S501N501YAatTat11B.1.2650.001271
S501N501YAatTat11B.1.30.002618
S501N501YAatTat11B.1.3430.020833
S501N501YAatTat11B.1.3540.043478
S501N501YAatTat11B.1.36.100.004785
S501N501YAatTat11B.1.36.170.000494
S501N501YAatTat11B.1.36.80.001
S501N501YAatTat11B.1.390.003906
S501N501YAatTat11B.1.3910.001127
S501N501YAatTat11B.1.3930.028571
S501N501YAatTat11B.1.400.10.015152
S501N501YAatTat11B.1.415.10.007576
S501N501YAatTat11B.1.4320.011236
S501N501YAatTat11B.1.4330.003195
S501N501YAatTat11B.1.4410.009615
S501N501YAatTat11B.1.4450.011765
S501N501YAatTat11B.1.4620.007246
S501N501YAatTat11B.1.4690.00361
S501N501YAatTat11B.1.4730.019231
S501N501YAatTat11B.1.4970.000315
S501N501YAatTat11B.1.5050.004386
S501N501YAatTat11B.1.5060.02381
S501N501YAatTat11B.1.5230.002451
S501N501YAatTat11B.1.5450.014493
S501N501YAatTat11B.1.5480.035714
S501N501YAatTat11B.1.5490.007194
S501N501YAatTat11B.1.5650.00081
S501N501YAatTat11B.1.5670.003333
S501N501YAatTat11B.1.6010.030303
S501N501YAatTat11B.1.6250.002353
S501N501YAatTat11B.1.6300.005236
S501N501YAatTat11B.1.780.008547
S501N501YAatTat11B.1.910.002075
S501N501YAatTat11B.1.940.027027
S501N501YAatTat11B.350.007812
S501N501YAatTat11B.40.002208
S501N501YAatTat11C.380.008065
S501N501YAatTat11N.60.007092
S501N501YAatTat11N.80.03125
S501N501YAatTat11N.90.005952