CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N501T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S501N501TnonsynaAtaCt478447800.99916423063-23065
S501N501TnonsynaATaCA478440.0008361223063-23065

Details of the mutation N501T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S501N501TaAtaCt47804784All0.000914
S501N501TaATaCA44784All0.000001
S501N501TaAtaCt22652265B.1.5170.967122
S501N501TaAtaCt508508B.1.10.009216
S501N501TaAtaCt377377A.280.997354
S501N501TaAtaCt237237B.1.20.002087
S501N501TaAtaCt202202B.10.00185
S501N501TaAtaCt174174B.1.517.10.915789
S501N501TaAtaCt172172B.1.6260.982857
S501N501TaAtaCt146146C.2.10.973333
S501N501TaAtaCt103103B.1.415.10.780303
S501N501TaAtaCt5656P.50.767123
S501N501TaAtaCt5151B.1.243.20.73913
S501N501TaAtaCt3838B.1.6090.018217
S501N501TaAtaCt3030B.1.1.3180.009053
S501N501TaAtaCt3030C.20.483871
S501N501TaAtaCt2121AY.40.000033
S501N501TaAtaCt2020AY.1020.00053
S501N501TaAtaCt2020B.1.36.10.022805
S501N501TaAtaCt1919B.1.1.4190.140741
S501N501TaAtaCt1717B.1.2210.001208
S501N501TaAtaCt1515C.370.001741
S501N501TaAtaCt1414B.1.1650.166667
S501N501TaAtaCt1313AY.260.000368
S501N501TaAtaCt1313B.1.1.10.004247
S501N501TaAtaCt1313B.1.617.20.000049
S501N501TaAtaCt1212B.1.5360.285714
S501N501TaAtaCt1111A0.004257
S501N501TaAtaCt1111B.1.5960.000959
S501N501TaAtaCt99B.1.1.2740.045455
S501N501TaAtaCt88AY.410.002352
S501N501TaAtaCt88B.1.1.2180.061538
S501N501TaAtaCt77C.360.006375
S501N501TaAtaCt66A.20.003971
S501N501TaAtaCt66B.1.1.330.002525
S501N501TaAtaCt55AY.1030.000031
S501N501TaAtaCt45AY.430.000018
S501N501TaATaCA15AY.430.000004
S501N501TaAtaCt55B.1.1.2140.000277
S501N501TaAtaCt44AY.290.000063
S501N501TaAtaCt44AY.330.000267
S501N501TaAtaCt44AY.420.000161
S501N501TaAtaCt44B0.000511
S501N501TaAtaCt44B.1.1.280.001245
S501N501TaAtaCt44B.1.110.30.002874
S501N501TaAtaCt44B.1.177.810.000757
S501N501TaAtaCt44B.1.2430.000278
S501N501TaAtaCt44B.1.5260.000094
S501N501TaAtaCt33B.1.1.2910.002227
S501N501TaAtaCt33B.1.1.3060.001315
S501N501TaAtaCt33B.1.1.3760.017857
S501N501TaAtaCt33B.1.1770.00004
S501N501TaAtaCt33B.1.466.20.001174
S501N501TaAtaCt33B.1.4730.057692
S501N501TaAtaCt33B.1.5650.002431
S501N501TaATaCA33B.1.6040.051724
S501N501TaAtaCt22AY.1180.000125
S501N501TaAtaCt22AY.390.000049
S501N501TaAtaCt22AY.39.10.000079
S501N501TaAtaCt22AY.440.000012
S501N501TaAtaCt22AY.920.000575
S501N501TaAtaCt22B.1.1.2200.003717
S501N501TaAtaCt22B.1.1.2690.002706
S501N501TaAtaCt22B.1.1.3720.001377
S501N501TaAtaCt22B.1.1.4480.004065
S501N501TaAtaCt22B.1.3690.00057
S501N501TaAtaCt22P.1.120.000968
S501N501TaAtaCt11A.190.009434
S501N501TaAtaCt11AY.10.000396
S501N501TaAtaCt11AY.1000.000046
S501N501TaAtaCt11AY.1140.000231
S501N501TaAtaCt11AY.1170.000085
S501N501TaAtaCt11AY.200.000039
S501N501TaAtaCt11AY.250.000006
S501N501TaAtaCt11AY.34.10.00051
S501N501TaAtaCt11AY.4.20.000022
S501N501TaAtaCt11AY.470.000031
S501N501TaAtaCt11AY.540.000095
S501N501TaAtaCt11AY.570.000656
S501N501TaAtaCt11AY.610.000105
S501N501TaAtaCt11AY.9.20.000037
S501N501TaAtaCt11AY.980.000079
S501N501TaAtaCt11AY.98.10.000048
S501N501TaAtaCt11AY.99.20.000092
S501N501TaAtaCt11B.1.1.1610.003534
S501N501TaAtaCt11B.1.1.2070.001182
S501N501TaAtaCt11B.1.1.2190.005
S501N501TaAtaCt11B.1.1.2660.012195
S501N501TaAtaCt11B.1.1.2940.001266
S501N501TaAtaCt11B.1.1.3800.009804
S501N501TaAtaCt11B.1.1.3980.003226
S501N501TaAtaCt11B.1.1.4240.045455
S501N501TaAtaCt11B.1.1.5180.006329
S501N501TaAtaCt11B.1.1.5190.00004
S501N501TaAtaCt11B.1.1.5250.005464
S501N501TaAtaCt11B.1.1.70.000001
S501N501TaAtaCt11B.1.1040.00369
S501N501TaAtaCt11B.1.1100.004525
S501N501TaAtaCt11B.1.1400.018868
S501N501TaAtaCt11B.1.1570.002985
S501N501TaAtaCt11B.1.160.160.000929
S501N501TaAtaCt11B.1.177.500.004695
S501N501TaAtaCt11B.1.177.730.000566
S501N501TaAtaCt11B.1.2200.01087
S501N501TaAtaCt11B.1.2340.000132
S501N501TaAtaCt11B.1.2410.000812
S501N501TaAtaCt11B.1.2790.000514
S501N501TaAtaCt11B.1.3110.000275
S501N501TaAtaCt11B.1.3240.001605
S501N501TaAtaCt11B.1.3360.002439
S501N501TaAtaCt11B.1.3430.020833
S501N501TaAtaCt11B.1.351.20.000303
S501N501TaAtaCt11B.1.360.000146
S501N501TaAtaCt11B.1.3620.001541
S501N501TaAtaCt11B.1.3780.006849
S501N501TaAtaCt11B.1.4000.000429
S501N501TaAtaCt11B.1.4290.000024
S501N501TaAtaCt11B.1.4360.001029
S501N501TaAtaCt11B.1.5670.003333
S501N501TaAtaCt11B.1.6230.000536
S501N501TaAtaCt11B.520.010101
S501N501TaAtaCt11C.90.030303