CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N501S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S501N501SnonsynaAtaGt2092010.96172223063-23065
S501N501SnonsynAAtTCt20950.023923423063-23065
S501N501SnonsynAATTCC20930.014354123063-23065

Details of the mutation N501S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S501N501SaAtaGt201209All0.000038
S501N501SAAtTCt5209All0.000001
S501N501SAATTCC3209All0.000001
S501N501SaAtaGt4141AY.40.000064
S501N501SaAtaGt2121AY.290.000331
S501N501SaAtaGt2020AY.430.000089
S501N501SaAtaGt1414AY.440.000085
S501N501SaAtaGt1111B.1.4290.000259
S501N501SaAtaGt1010AY.250.00006
S501N501SaAtaGt99AY.470.00028
S501N501SaAtaGt77AY.1030.000043
S501N501SaAtaGt66B.1.1770.000079
S501N501SaAtaGt34B.10.000027
S501N501SAAtTCt14B.10.000009
S501N501SaAtaGt44B.1.1.2140.000222
S501N501SaAtaGt44B.1.1600.000125
S501N501SaAtaGt44B.1.5260.000094
S501N501SaAtaGt33AY.30.00003
S501N501SaAtaGt33B.1.5950.000783
S501N501SaAtaGt33B.1.617.20.000011
S501N501SAATTCC220.111111
S501N501SaAtaGt22AY.1020.000053
S501N501SaAtaGt22AY.3.10.000171
S501N501SaAtaGt22AY.420.00008
S501N501SaAtaGt22AY.50.000041
S501N501SaAtaGt22AY.580.001815
S501N501SAAtTCt12AY.9.20.000037
S501N501SaAtaGt12AY.9.20.000037
S501N501SaAtaGt22B.1.1.5230.003125
S501N501SAAtTCt22B.1.1.70.000002
S501N501SaAtaGt22B.1.36.290.001035
S501N501SaAtaGt22B.1.3690.00057
S501N501SaAtaGt11AY.1150.005208
S501N501SaAtaGt11AY.1200.000037
S501N501SaAtaGt11AY.39.10.00004
S501N501SaAtaGt11AY.4.50.000107
S501N501SaAtaGt11AY.540.000095
S501N501SaAtaGt11AY.610.000105
S501N501SaAtaGt11AY.960.002075
S501N501SAATTCC11AY.980.000079
S501N501SAAtTCt11B.1.10.000018
S501N501SaAtaGt11B.1.1.1640.005155
S501N501SaAtaGt11B.1.1.5190.00004
S501N501SaAtaGt11B.1.1280.000635
S501N501SaAtaGt11B.1.160.160.000929
S501N501SaAtaGt11B.1.177.860.000183
S501N501SaAtaGt11B.1.20.000009
S501N501SaAtaGt11B.1.2400.000216
S501N501SaAtaGt11B.1.2580.000067
S501N501SaAtaGt11B.1.2670.018519
S501N501SaAtaGt11B.1.5770.000687
S501N501SaAtaGt11B.1.5960.000087
S501N501SaAtaGt11B.390.002331
S501N501SaAtaGt11C.370.000116
S501N501SaAtaGt11D.20.000075