CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N439K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S439N439KnonsynaaCaaA36642363460.99192222877-22879
S439N439KnonsynaaCaaG366422960.0080781622877-22879

Details of the mutation N439K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S439N439KaaCaaA3634636642All0.006952
S439N439KaaCaaG29636642All0.000057
S439N439KaaCaaA1444114441B.1.2580.961004
S439N439KaaCaaA92419241B.1.258.170.960803
S439N439KaaCaaA24662466B.1.258.110.977408
S439N439KaaCaaA23582358B.1.466.20.922535
S439N439KaaCaaA10091009B.1.258.140.989216
S439N439KaaCaaA608608B.1.258.160.99509
S439N439KaaCaaA578578B.1.258.30.968174
S439N439KaaCaaA573573B.1.2220.969543
S439N439KaaCaaA515515B.1.258.70.984704
S439N439KaaCaaA483483AU.10.611392
S439N439KaaCaaA406406AU.20.983051
S439N439KaaCaaA392395B.10.003591
S439N439KaaCaaG3395B.10.000027
S439N439KaaCaaA383383AU.30.808017
S439N439KaaCaaA375375B.1.258.221
S439N439KaaCaaA273273B.1.4800.679104
S439N439KaaCaaA269269B.1.258.40.927586
S439N439KaaCaaA214214B.1.258.20.963964
S439N439KaaCaaA200200B.1.258.91
S439N439KaaCaaG178178AV.10.89899
S439N439KaaCaaA141141B.1.258.191
S439N439KaaCaaA138138B.1.466.10.992806
S439N439KaaCaaA129129B.1.258.211
S439N439KaaCaaA124124B.1.258.120.976378
S439N439KaaCaaA113113B.1.258.50.991228
S439N439KaaCaaA9393B.1.258.241
S439N439KaaCaaA7992B.1.1.70.000071
S439N439KaaCaaG1392B.1.1.70.000012
S439N439KaaCaaA8888B.1.258.101
S439N439KaaCaaG5078B.1.10.000907
S439N439KaaCaaA2878B.1.10.000508
S439N439KaaCaaA6363B.1.258.201
S439N439KaaCaaA6161B.1.1.5260.216312
S439N439KaaCaaA5353B.1.258.151
S439N439KaaCaaA4949B.1.258.60.960784
S439N439KaaCaaA3333B.1.1.5240.6875
S439N439KaaCaaA2929B.1.1600.000904
S439N439KaaCaaA2929B.1.1770.000382
S439N439KaaCaaA2929B.1.258.230.690476
S439N439KaaCaaA2828B.1.6090.013423
S439N439KaaCaaA2424G.11
S439N439KaaCaaG1520AY.40.000023
S439N439KaaCaaA520AY.40.000008
S439N439KaaCaaA1919B.1.4620.137681
S439N439KaaCaaA1212B.1.4740.022814
S439N439KaaCaaA1212B.1.6280.004228
S439N439KaaCaaA1010B.1.258.181
S439N439KaaCaaA99B.1.360.001313
S439N439KaaCaaA58B0.000639
S439N439KaaCaaG38B0.000383
S439N439KaaCaaG88B.1.1.280.00249
S439N439KaaCaaA77A0.002709
S439N439KaaCaaA77B.1.177.730.003964
S439N439KaaCaaA77B.1.177.860.001284
S439N439KaaCaaA77B.1.6320.04698
S439N439KaaCaaA77B.4.10.132075
S439N439KaaCaaG46B.1.1.5190.000159
S439N439KaaCaaA26B.1.1.5190.000079
S439N439KaaCaaA66B.1.4690.021661
S439N439KaaCaaA55B.1.1.2160.004452
S439N439KaaCaaA55B.1.2210.000355
S439N439KaaCaaA45C.370.000464
S439N439KaaCaaG15C.370.000116
S439N439KaaCaaA44B.1.1.3890.024242
S439N439KaaCaaA44B.1.36.290.002069
S439N439KaaCaaA44B.1.3750.003279
S439N439KaaCaaA44B.1.5900.018182
S439N439KaaCaaA44B.1.6000.023392
S439N439KaaCaaA34B.1.617.20.000011
S439N439KaaCaaG14B.1.617.20.000004
S439N439KaaCaaA44P.70.017467
S439N439KaaCaaA33AY.430.000013
S439N439KaaCaaA33B.1.177.60.00293
S439N439KaaCaaA33B.1.4110.011111
S439N439KaaCaaA33B.1.4600.053571
S439N439KaaCaaG220.111111
S439N439KaaCaaG12AY.1020.000027
S439N439KaaCaaA12AY.1020.000027
S439N439KaaCaaA22AY.230.000139
S439N439KaaCaaA22B.1.1.1530.002191
S439N439KaaCaaA22B.1.1.390.001019
S439N439KaaCaaA22B.1.1.700.000682
S439N439KaaCaaA22B.1.177.440.001038
S439N439KaaCaaA22B.1.177.810.000379
S439N439KaaCaaA22B.1.36.170.000988
S439N439KaaCaaA22B.1.415.10.015152
S439N439KaaCaaA22B.1.4320.022472
S439N439KaaCaaA22B.1.4590.008163
S439N439KaaCaaG22B.1.5260.000047
S439N439KaaCaaA22B.1.5330.019231
S439N439KaaCaaA22B.1.5750.000607
S439N439KaaCaaA22B.1.5960.000174
S439N439KaaCaaA22B.1.617.10.000258
S439N439KaaCaaG22B.60.00182
S439N439KaaCaaG22Q.80.00033
S439N439KaaCaaA11A.190.009434
S439N439KaaCaaA11A.20.000662
S439N439KaaCaaA11A.2.50.000499
S439N439KaaCaaA11AY.1030.000006
S439N439KaaCaaA11AY.200.000039
S439N439KaaCaaA11AY.240.000431
S439N439KaaCaaA11AY.340.000097
S439N439KaaCaaG11AY.390.000025
S439N439KaaCaaG11AY.440.000006
S439N439KaaCaaG11B.1.1.1980.001468
S439N439KaaCaaG11B.1.1.2030.016949
S439N439KaaCaaA11B.1.1.2690.001353
S439N439KaaCaaG11B.1.1.330.000421
S439N439KaaCaaA11B.1.1.3790.03125
S439N439KaaCaaA11B.1.1.500.000679
S439N439KaaCaaA11B.1.1.510.001718
S439N439KaaCaaA11B.1.1.5230.001563
S439N439KaaCaaA11B.1.1.5280.004808
S439N439KaaCaaA11B.1.1430.021277
S439N439KaaCaaA11B.1.1570.002985
S439N439KaaCaaA11B.1.160.80.001289
S439N439KaaCaaA11B.1.177.310.011494
S439N439KaaCaaG11B.1.177.760.002494
S439N439KaaCaaA11B.1.20.000009
S439N439KaaCaaA11B.1.214.20.0006
S439N439KaaCaaA11B.1.2370.004975
S439N439KaaCaaA11B.1.2470.014925
S439N439KaaCaaA11B.1.2930.0125
S439N439KaaCaaG11B.1.3510.00003
S439N439KaaCaaA11B.1.3620.001541
S439N439KaaCaaA11B.1.3670.000792
S439N439KaaCaaA11B.1.3800.006623
S439N439KaaCaaA11B.1.3950.007042
S439N439KaaCaaA11B.1.4060.006061
S439N439KaaCaaA11B.1.4270.00005
S439N439KaaCaaG11B.1.4290.000024
S439N439KaaCaaA11B.1.4730.019231
S439N439KaaCaaA11B.1.5760.000907
S439N439KaaCaaA11B.1.5990.00365
S439N439KaaCaaG11B.1.6230.000536
S439N439KaaCaaA11B.1.6270.00202
S439N439KaaCaaA11B.1.6310.003367
S439N439KaaCaaA11B.1.6380.052632
S439N439KaaCaaG11L.30.003546
S439N439KaaCaaG11P.1.120.000484