CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = N1173S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1173N1173SnonsynaAtaGt1141130.99122825079-25081
S1173N1173SnonsynaATaGC11410.0087719325079-25081

Details of the mutation N1173S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1173N1173SaAtaGt113114All0.000022
S1173N1173SaATaGC1114All0
S1173N1173SaAtaGt4141B.1.1.70.000037
S1173N1173SaAtaGt99AY.1030.000056
S1173N1173SaAtaGt88AY.250.000048
S1173N1173SaAtaGt88B.1.1.5190.000318
S1173N1173SaAtaGt77B.1.5260.000165
S1173N1173SaAtaGt55AY.750.00028
S1173N1173SaAtaGt44AY.440.000024
S1173N1173SaAtaGt44B.1.177.150.002524
S1173N1173SaAtaGt44B.1.20.000035
S1173N1173SaAtaGt33AY.40.000005
S1173N1173SaAtaGt33B.10.000027
S1173N1173SaAtaGt120.055556
S1173N1173SaATaGC120.055556
S1173N1173SaAtaGt11AY.260.000028
S1173N1173SaAtaGt11AY.270.000065
S1173N1173SaAtaGt11AY.430.000004
S1173N1173SaAtaGt11AY.46.60.000072
S1173N1173SaAtaGt11AY.90.000068
S1173N1173SaAtaGt11B.1.10.000018
S1173N1173SaAtaGt11B.1.1.1350.004695
S1173N1173SaAtaGt11B.1.1.280.000311
S1173N1173SaAtaGt11B.1.110.30.000718
S1173N1173SaAtaGt11B.1.1600.000031
S1173N1173SaAtaGt11B.1.1770.000013
S1173N1173SaAtaGt11B.1.3510.00003
S1173N1173SaAtaGt11B.1.5380.008065
S1173N1173SaAtaGt11B.1.617.10.000129
S1173N1173SaAtaGt11B.1.617.20.000004
S1173N1173SaAtaGt11B.60.00091