CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = M153I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S153M153InonsynatGatT991285110.85865622019-22021
S153M153InonsynatGatA991212310.12419322019-22021
S153M153InonsynatGatC99121700.017150922019-22021

Details of the mutation M153I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S153M153IatGatT85119912All0.001628
S153M153IatGatA12319912All0.000235
S153M153IatGatC1709912All0.000033
S153M153IatGatT19772025AY.40.003077
S153M153IatGatA262025AY.40.00004
S153M153IatGatC222025AY.40.000034
S153M153IatGatT842968B.1.1.70.000754
S153M153IatGatA94968B.1.1.70.000084
S153M153IatGatC32968B.1.1.70.000029
S153M153IatGatT467486B.1.617.20.001758
S153M153IatGatA16486B.1.617.20.00006
S153M153IatGatC3486B.1.617.20.000011
S153M153IatGatT385449AY.440.002343
S153M153IatGatA63449AY.440.000383
S153M153IatGatC1449AY.440.000006
S153M153IatGatA356423AY.30.003541
S153M153IatGatT67423AY.30.000666
S153M153IatGatT380388AY.430.001684
S153M153IatGatC6388AY.430.000027
S153M153IatGatA2388AY.430.000009
S153M153IatGatT368368B.1.1.2220.075071
S153M153IatGatA206293B.10.001887
S153M153IatGatT86293B.10.000788
S153M153IatGatC1293B.10.000009
S153M153IatGatT285292B.1.20.00251
S153M153IatGatA5292B.1.20.000044
S153M153IatGatC2292B.1.20.000018
S153M153IatGatT244246AY.60.010035
S153M153IatGatA2246AY.60.000082
S153M153IatGatA235235B.1.5990.857664
S153M153IatGatT204225AY.250.001227
S153M153IatGatA19225AY.250.000114
S153M153IatGatC2225AY.250.000012
S153M153IatGatT203205AY.1020.005382
S153M153IatGatC2205AY.1020.000053
S153M153IatGatT197204B.1.1770.002594
S153M153IatGatA4204B.1.1770.000053
S153M153IatGatC3204B.1.1770.00004
S153M153IatGatT168171AY.1030.001043
S153M153IatGatA3171AY.1030.000019
S153M153IatGatT154155AY.610.016136
S153M153IatGatA1155AY.610.000105
S153M153IatGatT123123B.1.36.80.123
S153M153IatGatT116118B.1.3510.003448
S153M153IatGatA2118B.1.3510.000059
S153M153IatGatT110112AY.460.011449
S153M153IatGatC2112AY.460.000208
S153M153IatGatT9696B.1.10.001742
S153M153IatGatT8393B.1.1600.002589
S153M153IatGatA993B.1.1600.000281
S153M153IatGatC193B.1.1600.000031
S153M153IatGatT9191AY.330.006077
S153M153IatGatT7790P.10.001213
S153M153IatGatC890P.10.000126
S153M153IatGatA590P.10.000079
S153M153IatGatT6185AY.200.002371
S153M153IatGatC1985AY.200.000738
S153M153IatGatA585AY.200.000194
S153M153IatGatT8383B.1.1.2341
S153M153IatGatT7777B.1.5250.008713
S153M153IatGatT7575AY.46.40.012338
S153M153IatGatT7373B.1.214.20.043765
S153M153IatGatT6271AY.390.001532
S153M153IatGatA871AY.390.000198
S153M153IatGatC171AY.390.000025
S153M153IatGatT5960AY.260.00167
S153M153IatGatC160AY.260.000028
S153M153IatGatA4454AY.99.20.004055
S153M153IatGatT1054AY.99.20.000922
S153M153IatGatT5353B.1.2360.10883
S153M153IatGatT4242AY.98.10.002034
S153M153IatGatT3133AY.50.00064
S153M153IatGatC133AY.50.000021
S153M153IatGatA133AY.50.000021
S153M153IatGatT3232AY.1200.00119
S153M153IatGatT3132AY.470.000964
S153M153IatGatC132AY.470.000031
S153M153IatGatT2831AY.1180.001754
S153M153IatGatC331AY.1180.000188
S153M153IatGatT2930AY.420.001167
S153M153IatGatA130AY.420.00004
S153M153IatGatT2729B.1.360.003939
S153M153IatGatA229B.1.360.000292
S153M153IatGatT2627AY.290.00041
S153M153IatGatA127AY.290.000016
S153M153IatGatC2727B.1.1460.114407
S153M153IatGatA2627B.1.5770.017869
S153M153IatGatT127B.1.5770.000687
S153M153IatGatT2526B.1.617.10.003224
S153M153IatGatA126B.1.617.10.000129
S153M153IatGatT2525AY.39.10.00099
S153M153IatGatA2525B.1.177.570.007024
S153M153IatGatT2424B.1.4290.000565
S153M153IatGatT2222AY.340.002133
S153M153IatGatT2121AJ.10.954545
S153M153IatGatT2121AY.850.008971
S153M153IatGatT2020AY.120.10.006421
S153M153IatGatT1919B.1.5260.000447
S153M153IatGatT1618AY.1210.002165
S153M153IatGatA218AY.1210.000271
S153M153IatGatT1517AY.4.20.000325
S153M153IatGatC217AY.4.20.000043
S153M153IatGatT1717AY.46.60.001228
S153M153IatGatT1717B.1.2580.001131
S153M153IatGatT1516AY.160.005695
S153M153IatGatC116AY.160.00038
S153M153IatGatT1616B.1.1790.06015
S153M153IatGatT1515AY.270.000971
S153M153IatGatT1515AY.9.10.001256
S153M153IatGatT1515B.1.258.140.014706
S153M153IatGatT1314AY.1000.000598
S153M153IatGatA114AY.1000.000046
S153M153IatGatT1414AY.1060.004689
S153M153IatGatT1214B.1.6370.000877
S153M153IatGatC114B.1.6370.000073
S153M153IatGatA114B.1.6370.000073
S153M153IatGatA913AY.1170.000761
S153M153IatGatT413AY.1170.000338
S153M153IatGatT1313AY.870.010824
S153M153IatGatT1212AY.230.000837
S153M153IatGatT1212AY.29.10.002646
S153M153IatGatT1212AY.540.001144
S153M153IatGatT1212AY.750.000672
S153M153IatGatT1212AY.840.005249
S153M153IatGatT1212B.1.1.3260.021127
S153M153IatGatT712B.1.6210.00062
S153M153IatGatC512B.1.6210.000443
S153M153IatGatT1111AY.410.003233
S153M153IatGatT911B.1.1.5190.000357
S153M153IatGatC211B.1.1.5190.000079
S153M153IatGatT1111B.1.4270.000555
S153M153IatGatT1010B.1.177.710.10101
S153M153IatGatT89AY.4.50.00086
S153M153IatGatC19AY.4.50.000107
S153M153IatGatT99AY.75.10.001623
S153M153IatGatA69B.1.3110.001647
S153M153IatGatT29B.1.3110.000549
S153M153IatGatC19B.1.3110.000275
S153M153IatGatT88AY.450.000973
S153M153IatGatT88AY.5.40.002214
S153M153IatGatT88AY.980.000632
S153M153IatGatA88B.1.1.540.024169
S153M153IatGatT88B.1.2840.105263
S153M153IatGatT77AY.1190.000247
S153M153IatGatA57AY.140.00044
S153M153IatGatT27AY.140.000176
S153M153IatGatT77AY.70.001372
S153M153IatGatT67AY.790.007264
S153M153IatGatA17AY.790.001211
S153M153IatGatT77AY.9.20.000257
S153M153IatGatT77B.1.1.500.004752
S153M153IatGatT77B.1.177.120.001062
S153M153IatGatT77B.1.177.600.001529
S153M153IatGatT67C.370.000696
S153M153IatGatA17C.370.000116
S153M153IatGatT66AY.590.003178
S153M153IatGatT66AY.620.002614
S153M153IatGatT66AY.880.005305
S153M153IatGatT66B.1.1.3060.00263
S153M153IatGatA56B.1.4220.004062
S153M153IatGatT16B.1.4220.000812
S153M153IatGatT66P.20.00112
S153M153IatGatT56Q.80.000825
S153M153IatGatC16Q.80.000165
S153M153IatGatT55AY.1130.000712
S153M153IatGatT55AY.190.005701
S153M153IatGatT55AY.320.002662
S153M153IatGatT55AY.360.000741
S153M153IatGatT55AY.7.10.000564
S153M153IatGatT55AY.700.001043
S153M153IatGatT45B0.000511
S153M153IatGatA15B0.000128
S153M153IatGatT55B.1.1.250.002843
S153M153IatGatT55B.1.1.280.001556
S153M153IatGatT55B.1.1.3910.042735
S153M153IatGatT55B.1.177.560.003338
S153M153IatGatT55B.1.177.620.005959
S153M153IatGatT45B.1.2430.000278
S153M153IatGatC15B.1.2430.00007
S153M153IatGatT44AY.1080.00441
S153M153IatGatT44AY.120.001264
S153M153IatGatT34AY.46.20.001906
S153M153IatGatC14AY.46.20.000635
S153M153IatGatT44AY.630.001547
S153M153IatGatT44AY.90.00027
S153M153IatGatT44B.1.1390.002933
S153M153IatGatT44B.1.177.50.004969
S153M153IatGatA24B.1.177.860.000367
S153M153IatGatC14B.1.177.860.000183
S153M153IatGatT14B.1.177.860.000183
S153M153IatGatT44B.1.2340.000528
S153M153IatGatT44B.1.36.360.002408
S153M153IatGatT44B.1.4130.017021
S153M153IatGatT24B.400.000729
S153M153IatGatC24B.400.000729
S153M153IatGatT23A0.000774
S153M153IatGatA13A0.000387
S153M153IatGatT33AY.100.00159
S153M153IatGatC13AY.3.10.000085
S153M153IatGatA13AY.3.10.000085
S153M153IatGatT13AY.3.10.000085
S153M153IatGatT33AY.34.10.00153
S153M153IatGatT33AY.710.001425
S153M153IatGatT33AY.820.004071
S153M153IatGatT23B.1.1.10.000653
S153M153IatGatA13B.1.1.10.000327
S153M153IatGatT33B.1.1.120.022388
S153M153IatGatC33B.1.1.1530.003286
S153M153IatGatT33B.1.1.4160.002715
S153M153IatGatT33B.1.177.140.018293
S153M153IatGatT33B.1.177.90.003995
S153M153IatGatT23B.1.2210.000142
S153M153IatGatA13B.1.2210.000071
S153M153IatGatT33B.1.3890.003006
S153M153IatGatT33L.30.010638
S153M153IatGatT23P.1.140.000096
S153M153IatGatA13P.1.140.000048
S153M153IatGatC13P.1.150.000232
S153M153IatGatT13P.1.150.000232
S153M153IatGatA13P.1.150.000232
S153M153IatGatT33P.1.170.000485
S153M153IatGatT33P.1.70.000958
S153M153IatGatT22A.23.10.001408
S153M153IatGatT22AY.1070.000932
S153M153IatGatT22AY.1160.000574
S153M153IatGatC12AY.16.10.00047
S153M153IatGatT12AY.16.10.00047
S153M153IatGatT22AY.20.000712
S153M153IatGatT22AY.280.003781
S153M153IatGatT22AY.300.000791
S153M153IatGatT22AY.380.000999
S153M153IatGatA22AY.4.2.10.000298
S153M153IatGatT22AY.400.001929
S153M153IatGatT22AY.530.000575
S153M153IatGatT22AY.580.001815
S153M153IatGatT22AY.600.001876
S153M153IatGatT22AY.690.000373
S153M153IatGatT22AY.910.001461
S153M153IatGatT12AY.920.000287
S153M153IatGatA12AY.920.000287
S153M153IatGatT22AY.940.000885
S153M153IatGatT22B.1.1.1160.125
S153M153IatGatT22B.1.1.1570.001826
S153M153IatGatT22B.1.1.2160.001781
S153M153IatGatT22B.1.1.2200.003717
S153M153IatGatT22B.1.1.2740.010101
S153M153IatGatT22B.1.1.2840.000215
S153M153IatGatT22B.1.1.3040.005618
S153M153IatGatT22B.1.1.3180.000604
S153M153IatGatT22B.1.1.330.000842
S153M153IatGatT22B.1.1.3550.030769
S153M153IatGatT22B.1.1.3690.000892
S153M153IatGatT12B.1.1.370.000193
S153M153IatGatA12B.1.1.370.000193
S153M153IatGatT22B.1.1.710.012121
S153M153IatGatT22B.1.1570.00597
S153M153IatGatT22B.1.2320.001075
S153M153IatGatT22B.1.258.170.000208
S153M153IatGatT22B.1.2890.005319
S153M153IatGatA22B.1.3020.026667
S153M153IatGatT22B.1.36.180.00084
S153M153IatGatT22B.1.36.350.005208
S153M153IatGatT22B.1.3620.003082
S153M153IatGatT22B.1.3660.009756
S153M153IatGatT12B.1.3690.000285
S153M153IatGatA12B.1.3690.000285
S153M153IatGatT22B.1.4040.002604
S153M153IatGatT22B.1.4260.002018
S153M153IatGatT22B.1.4280.002041
S153M153IatGatT22B.1.4410.019231
S153M153IatGatT22B.1.466.20.000782
S153M153IatGatT22B.1.4990.002101
S153M153IatGatT22B.1.5210.00995
S153M153IatGatT22B.1.5600.009259
S153M153IatGatT22B.1.5650.001621
S153M153IatGatA12B.1.5760.000907
S153M153IatGatT12B.1.5760.000907
S153M153IatGatT22B.1.5960.000174
S153M153IatGatT22B.1.6090.000959
S153M153IatGatT22B.1.6120.005305
S153M153IatGatT22B.1.6180.008065
S153M153IatGatT22B.60.00182
S153M153IatGatT22P.1.100.000539
S153M153IatGatT22P.1.120.000968
S153M153IatGatT22P.60.006289
S153M153IatGatC12Q.30.000145
S153M153IatGatT12Q.30.000145
S153M153IatGatA11A.20.000662
S153M153IatGatT11A.2.5.20.001572
S153M153IatGatT11A.230.010526
S153M153IatGatT11AD.20.000219
S153M153IatGatT11AY.10.000396
S153M153IatGatT11AY.1010.00049
S153M153IatGatT11AY.1050.000643
S153M153IatGatT11AY.1100.000113
S153M153IatGatT11AY.1110.000183
S153M153IatGatT11AY.180.010101
S153M153IatGatT11AY.23.10.000417
S153M153IatGatT11AY.370.000316
S153M153IatGatT11AY.4.10.000737
S153M153IatGatT11AY.4.40.000409
S153M153IatGatT11AY.46.30.000934
S153M153IatGatT11AY.480.000465
S153M153IatGatT11AY.5.30.000337
S153M153IatGatT11AY.520.000814
S153M153IatGatT11AY.650.000533
S153M153IatGatT11AY.660.00107
S153M153IatGatT11AY.670.000464
S153M153IatGatT11AY.680.000274
S153M153IatGatT11AY.720.001361
S153M153IatGatT11AY.780.001541
S153M153IatGatT11AY.860.00083
S153M153IatGatT11AY.890.004902
S153M153IatGatT11AY.930.000273
S153M153IatGatT11AY.950.000761
S153M153IatGatT11B.1.1.1330.008475
S153M153IatGatA11B.1.1.1760.000439
S153M153IatGatT11B.1.1.1940.00495
S153M153IatGatT11B.1.1.1980.001468
S153M153IatGatA11B.1.1.2140.000055
S153M153IatGatT11B.1.1.2280.003049
S153M153IatGatT11B.1.1.2320.001815
S153M153IatGatT11B.1.1.2360.006897
S153M153IatGatT11B.1.1.2630.001558
S153M153IatGatT11B.1.1.2790.001121
S153M153IatGatC11B.1.1.2940.001266
S153M153IatGatC11B.1.1.2980.000862
S153M153IatGatC11B.1.1.3110.000358
S153M153IatGatT11B.1.1.3120.001912
S153M153IatGatT11B.1.1.3250.025641
S153M153IatGatT11B.1.1.3810.04
S153M153IatGatT11B.1.1.3980.003226
S153M153IatGatT11B.1.1.4040.015873
S153M153IatGatT11B.1.1.4340.000349
S153M153IatGatT11B.1.1.4420.018519
S153M153IatGatT11B.1.1.4640.001473
S153M153IatGatT11B.1.1.5260.003546
S153M153IatGatT11B.1.1.530.013699
S153M153IatGatT11B.1.1.700.000341
S153M153IatGatT11B.1.1.80.003584
S153M153IatGatT11B.1.1190.010526
S153M153IatGatT11B.1.1260.001276
S153M153IatGatT11B.1.160.140.002119
S153M153IatGatT11B.1.160.80.001289
S153M153IatGatT11B.1.1620.005025
S153M153IatGatT11B.1.177.100.000878
S153M153IatGatT11B.1.177.160.000664
S153M153IatGatC11B.1.177.330.001645
S153M153IatGatT11B.1.177.440.000519
S153M153IatGatT11B.1.177.460.000918
S153M153IatGatA11B.1.177.540.000606
S153M153IatGatT11B.1.1890.004292
S153M153IatGatT11B.1.214.30.007143
S153M153IatGatT11B.1.2220.001692
S153M153IatGatT11B.1.2400.000216
S153M153IatGatT11B.1.2500.014493
S153M153IatGatC11B.1.2790.000514
S153M153IatGatT11B.1.3010.005917
S153M153IatGatT11B.1.3190.003049
S153M153IatGatT11B.1.3230.020833
S153M153IatGatA11B.1.3240.001605
S153M153IatGatT11B.1.3460.001311
S153M153IatGatT11B.1.351.20.000303
S153M153IatGatT11B.1.351.50.0006
S153M153IatGatT11B.1.36.10.00114
S153M153IatGatT11B.1.36.220.001208
S153M153IatGatT11B.1.36.290.000517
S153M153IatGatT11B.1.3610.001289
S153M153IatGatA11B.1.3670.000792
S153M153IatGatT11B.1.390.003906
S153M153IatGatT11B.1.3990.001934
S153M153IatGatA11B.1.4000.000429
S153M153IatGatT11B.1.4590.004082
S153M153IatGatT11B.1.4650.003802
S153M153IatGatC11B.1.4740.001901
S153M153IatGatT11B.1.4970.000315
S153M153IatGatT11B.1.5330.009615
S153M153IatGatT11B.1.5370.02
S153M153IatGatT11B.1.5400.009709
S153M153IatGatA11B.1.5610.000397
S153M153IatGatT11B.1.5780.017857
S153M153IatGatT11B.1.5820.000491
S153M153IatGatT11B.1.617.30.002985
S153M153IatGatT11B.1.619.10.000641
S153M153IatGatT11B.1.6200.000946
S153M153IatGatT11B.1.621.10.000506
S153M153IatGatT11B.30.000831
S153M153IatGatT11B.40.002208
S153M153IatGatA11B.6.60.000889
S153M153IatGatT11C.260.007353
S153M153IatGatA11C.300.001727
S153M153IatGatT11C.350.000774
S153M153IatGatT11C.36.10.004149
S153M153IatGatA11C.36.30.000567
S153M153IatGatA11N.50.001767
S153M153IatGatA11P.1.40.000977
S153M153IatGatT11Q.10.000126
S153M153IatGatT11R.10.00009