CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L996L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S996L996LsynttGttA4123390.82281624548-24550
S996L996LsynTtgCtg412730.17718424548-24550

Details of the mutation L996L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S996L996LttGttA339412All0.000065
S996L996LTtgCtg73412All0.000014
S996L996LttGttA141141B.1.617.20.000531
S996L996LttGttA4646AY.1020.00122
S996L996LttGttA3232B.1.1610.551724
S996L996LTtgCtg2828B.1.5640.011925
S996L996LttGttA2124AY.40.000033
S996L996LTtgCtg324AY.40.000005
S996L996LttGttA1313AY.290.000205
S996L996LTtgCtg1212B.1.3690.003423
S996L996LttGttA910B.1.1.70.000008
S996L996LTtgCtg110B.1.1.70.000001
S996L996LTtgCtg89AY.30.00008
S996L996LttGttA19AY.30.00001
S996L996LTtgCtg89B.10.000073
S996L996LttGttA19B.10.000009
S996L996LttGttA88AY.4.2.10.001192
S996L996LttGttA58AY.430.000022
S996L996LTtgCtg38AY.430.000013
S996L996LttGttA45AY.440.000024
S996L996LTtgCtg15AY.440.000006
S996L996LttGttA55B.1.4290.000118
S996L996LttGttA33AY.390.000074
S996L996LttGttA33AY.46.30.002801
S996L996LttGttA33B.1.10.000054
S996L996LttGttA33B.1.1.1920.006928
S996L996LttGttA22AY.1030.000012
S996L996LttGttA22AY.1190.000071
S996L996LttGttA22B.1.1.3260.003521
S996L996LttGttA12B.1.1770.000013
S996L996LTtgCtg12B.1.1770.000013
S996L996LttGttA22B.1.2340.000264
S996L996LttGttA22B.1.360.000292
S996L996LttGttA22B.1.617.10.000258
S996L996LttGttA22P.10.000032
S996L996LttGttA11AU.10.001266
S996L996LttGttA11AY.1060.000335
S996L996LttGttA11AY.1170.000085
S996L996LttGttA11AY.1180.000063
S996L996LttGttA11AY.1200.000037
S996L996LttGttA11AY.130.000161
S996L996LttGttA11AY.330.000067
S996L996LttGttA11AY.4.20.000022
S996L996LttGttA11AY.420.00004
S996L996LttGttA11AY.450.000122
S996L996LttGttA11AY.460.000104
S996L996LttGttA11AY.50.000021
S996L996LttGttA11AY.520.000814
S996L996LttGttA11AY.550.000917
S996L996LttGttA11AY.590.00053
S996L996LttGttA11AY.880.000884
S996L996LTtgCtg11AY.930.000273
S996L996LTtgCtg11AY.980.000079
S996L996LttGttA11B.1.1.2220.000204
S996L996LTtgCtg11B.1.1.370.000193
S996L996LttGttA11B.1.1.390.00051
S996L996LttGttA11B.1.1600.000031
S996L996LTtgCtg11B.1.160.140.002119
S996L996LttGttA11B.1.3110.000275
S996L996LTtgCtg11B.1.3510.00003
S996L996LttGttA11B.1.36.340.021277
S996L996LttGttA11B.1.4160.001269
S996L996LttGttA11B.1.5260.000024
S996L996LTtgCtg11B.1.5330.009615
S996L996LttGttA11B.1.5610.000397
S996L996LTtgCtg11B.1.6090.000479
S996L996LttGttA11P.1.150.000232
S996L996LTtgCtg11P.1.160.000374
S996L996LttGttA11Q.30.000145