CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L878del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S878L878del1delttAtt-750.71428624194-24196
S878L878del1delTta-ta710.14285724194-24196
S878L878del1delTTAAC-710.14285724194-24196

Details of the mutation L878del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S878L878del1ttAtt-57All0.000001
S878L878del1Tta-ta17All0
S878L878del1TTAAC-17All0
S878L878del1ttAtt-22B.10.000018
S878L878del1ttAtt-11AY.430.000004
S878L878del1TTAAC-11AY.670.000464
S878L878del1Tta-ta11B.1.1.70.000001
S878L878del1ttAtt-11B.1.177.440.000519
S878L878del1ttAtt-11B.1.5820.000491