CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L244L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S244L244LsynTtaCta6955240.75395722292-22294
S244L244LsynttAttG6951660.23884922292-22294
S244L244LsynTtACtT69540.005755422292-22294
S244L244LsynTtACtC69510.0014388522292-22294

Details of the mutation L244L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S244L244LTtaCta524695All0.0001
S244L244LttAttG166695All0.000032
S244L244LTtACtT4695All0.000001
S244L244LTtACtC1695All0
S244L244LTtaCta141183AY.40.000219
S244L244LttAttG42183AY.40.000065
S244L244LTtaCta175176AY.1020.00464
S244L244LTtACtT1176AY.1020.000027
S244L244LTtaCta5771B.1.617.20.000215
S244L244LttAttG1471B.1.617.20.000053
S244L244LttAttG1426B.1.1.70.000013
S244L244LTtaCta1226B.1.1.70.000011
S244L244LTtaCta1523B.1.20.000132
S244L244LttAttG823B.1.20.00007
S244L244LTtaCta1316AY.430.000058
S244L244LttAttG316AY.430.000013
S244L244LttAttG1616AY.750.000896
S244L244LttAttG1616Q.40.007276
S244L244LttAttG1414B.1.2650.017789
S244L244LTtaCta1112AY.440.000067
S244L244LttAttG112AY.440.000006
S244L244LTtaCta1011B.1.1770.000132
S244L244LTtACtT111B.1.1770.000013
S244L244LttAttG48AY.1030.000025
S244L244LTtaCta48AY.1030.000025
S244L244LTtaCta67AY.1180.000376
S244L244LttAttG17AY.1180.000063
S244L244LTtaCta57B.10.000046
S244L244LttAttG27B.10.000018
S244L244LTtaCta77P.10.00011
S244L244LTtaCta66B.1.4290.000141
S244L244LTtaCta35AY.4.50.000322
S244L244LttAttG25AY.4.50.000215
S244L244LTtaCta44AY.98.10.000194
S244L244LttAttG33AY.200.000117
S244L244LTtaCta33AY.260.000085
S244L244LTtaCta33AY.34.10.00153
S244L244LTtaCta33AY.460.000312
S244L244LTtaCta33AY.46.10.00308
S244L244LttAttG33AY.610.000314
S244L244LTtaCta33AY.980.000237
S244L244LTtaCta33B.1.1.3110.001074
S244L244LTtaCta33B.1.177.820.001432
S244L244LttAttG33B.1.214.20.001799
S244L244LTtaCta22AY.10.000791
S244L244LTtaCta22AY.1190.000071
S244L244LttAttG22AY.140.000176
S244L244LTtaCta22AY.390.000049
S244L244LTtaCta12AY.4.20.000022
S244L244LttAttG12AY.4.20.000022
S244L244LTtaCta22AY.50.000041
S244L244LttAttG22AY.530.000575
S244L244LttAttG12B.1.10.000018
S244L244LTtaCta12B.1.10.000018
S244L244LttAttG12B.1.1.5190.00004
S244L244LTtaCta12B.1.1.5190.00004
S244L244LttAttG22B.1.360.000292
S244L244LTtaCta22B.1.5170.000854
S244L244LttAttG22B.1.6210.000177
S244L244LTtaCta11A.30.002096
S244L244LttAttG11AY.1010.00049
S244L244LTtaCta11AY.1130.000142
S244L244LttAttG11AY.1200.000037
S244L244LTtaCta11AY.230.00007
S244L244LttAttG11AY.250.000006
S244L244LTtaCta11AY.29.10.000221
S244L244LTtaCta11AY.30.00001
S244L244LTtaCta11AY.360.000148
S244L244LTtaCta11AY.420.00004
S244L244LttAttG11AY.550.000917
S244L244LTtaCta11AY.840.000437
S244L244LTtaCta11AY.90.000068
S244L244LTtACtT11B.1.1.10.000327
S244L244LttAttG11B.1.1.1890.001513
S244L244LttAttG11B.1.1.2040.00304
S244L244LttAttG11B.1.1.2140.000055
S244L244LTtaCta11B.1.177.40.000211
S244L244LttAttG11B.1.2210.000071
S244L244LTtaCta11B.1.2400.000216
S244L244LTtaCta11B.1.2580.000067
S244L244LTtaCta11B.1.258.170.000104
S244L244LTtACtC11B.1.351.10.038462
S244L244LTtaCta11B.1.36.190.009259
S244L244LTtaCta11B.1.5260.000024
S244L244LTtaCta11B.1.5770.000687
S244L244LTtaCta11B.1.6390.021739
S244L244LttAttG11B.6.60.000889
S244L244LTtaCta11C.370.000116
S244L244LTtaCta11D.20.000075
S244L244LTtaCta11P.1.120.000484
S244L244LTtACtT11P.30.001595
S244L244LTtaCta11Q.80.000165