CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L18del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S18L18del1delcTtc-t830.37521614-21616
S18L18del1delCTt-Nt820.2521614-21616
S18L18del1delCtT-tC810.12521614-21616
S18L18del1delCTT-NN810.12521614-21616
S18L18del1delCtt-tt810.12521614-21616

Details of the mutation L18del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S18L18del1cTtc-t38All0.000001
S18L18del1CTt-Nt28All0
S18L18del1CtT-tC18All0
S18L18del1CTT-NN18All0
S18L18del1Ctt-tt18All0
S18L18del1CtT-tC11AY.440.000006
S18L18del1cTtc-t11B.1.10.000018
S18L18del1CTt-Nt11B.1.1.10.000327
S18L18del1Ctt-tt11B.1.1600.000031
S18L18del1cTtc-t11B.1.20.000009
S18L18del1CTt-Nt11B.1.36.370.002778
S18L18del1cTtc-t11B.1.5950.000261
S18L18del1CTT-NN11P.10.000016