CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L18R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S18L18RnonsyncTtcGt347634700.99827421614-21616
S18L18RnonsyncTTcGG347660.0017261221614-21616

Details of the mutation L18R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S18L18RcTtcGt34703476All0.000664
S18L18RcTTcGG63476All0.000001
S18L18RcTtcGt27382738B.1.6280.964764
S18L18RcTtcGt290290B.1.6310.976431
S18L18RcTtcGt281281B.1.6340.962329
S18L18RcTtcGt9396B.10.000852
S18L18RcTTcGG396B.10.000027
S18L18RcTtcGt1313B.1.6270.026263
S18L18RcTtcGt77P.1.120.003388
S18L18RcTtcGt66B.1.10.000109
S18L18RcTtcGt33AY.330.0002
S18L18RcTtcGt33B.1.1.70.000003
S18L18RcTtcGt33B.1.617.20.000011
S18L18RcTtcGt22AY.1060.00067
S18L18RcTtcGt22AY.440.000012
S18L18RcTtcGt22B.1.177.730.001133
S18L18RcTtcGt22B.1.2210.000142
S18L18RcTtcGt22B.1.4290.000047
S18L18RcTtcGt22B.1.5170.000854
S18L18RcTtcGt22B.1.5960.000174
S18L18RcTtcGt11A.2.5.20.001572
S18L18RcTtcGt11AY.1000.000046
S18L18RcTtcGt11AY.1030.000006
S18L18RcTtcGt11AY.1160.000287
S18L18RcTtcGt11AY.30.00001
S18L18RcTtcGt11AY.390.000025
S18L18RcTtcGt11AY.730.000665
S18L18RcTtcGt11B0.000128
S18L18RcTtcGt11B.1.1.1170.009709
S18L18RcTTcGG11B.1.1.2820.011628
S18L18RcTtcGt11B.1.1.5190.00004
S18L18RcTTcGG11B.1.2100.002132
S18L18RcTtcGt11B.1.2320.000537
S18L18RcTtcGt11B.1.2470.014925
S18L18RcTtcGt11B.1.3510.00003
S18L18RcTTcGG11B.1.360.000146
S18L18RcTtcGt11B.1.3750.00082
S18L18RcTtcGt11B.1.3820.008929
S18L18RcTtcGt11B.1.4270.00005
S18L18RcTtcGt11B.1.5750.000303
S18L18RcTtcGt11B.1.6190.000871
S18L18RcTtcGt11B.550.00295