CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = L18F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S18L18FnonsynCttTtt2222712222670.99998221614-21616
S18L18FnonsynCtTTtC22227140.00001799621614-21616

Details of the mutation L18F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S18L18FCttTtt222267222271All0.042511
S18L18FCtTTtC4222271All0.000001
S18L18FCttTtt6205362053P.10.977582
S18L18FCttTtt3854338543B.1.1770.507519
S18L18FCttTtt2084720850P.1.140.996511
S18L18FCtTTtC320850P.1.140.000143
S18L18FCttTtt1142411424B.1.3510.339596
S18L18FCttTtt78037803B.1.1.70.006985
S18L18FCttTtt60706070P.1.170.981883
S18L18FCttTtt58165816B.1.177.70.958787
S18L18FCttTtt53475347B.1.177.860.980921
S18L18FCttTtt51725172B.1.20.045541
S18L18FCttTtt45684568B.1.177.600.997816
S18L18FCttTtt42044204P.1.150.976766
S18L18FCttTtt36553655P.1.100.98491
S18L18FCttTtt32243224B.1.351.20.975492
S18L18FCttTtt31793179AY.40.004948
S18L18FCttTtt31043104P.1.70.99106
S18L18FCttTtt29442944P.1.10.935197
S18L18FCttTtt25522552P.1.160.954733
S18L18FCttTtt17971797P.1.120.869797
S18L18FCttTtt15901590B.1.351.50.953237
S18L18FCttTtt14811481B.1.177.650.985363
S18L18FCttTtt13641364B.1.5260.03206
S18L18FCttTtt12131213B.1.177.80.912716
S18L18FCttTtt11411141P.1.17.10.99825
S18L18FCttTtt11221122B.1.351.30.983348
S18L18FCttTtt11211121B.10.010268
S18L18FCttTtt10781078P.1.130.968553
S18L18FCttTtt10231023P.1.40.999023
S18L18FCttTtt969969B.1.177.60.946289
S18L18FCttTtt950950B.1.1.4200.955734
S18L18FCttTtt856856P.1.20.989595
S18L18FCttTtt809809B.1.177.620.964243
S18L18FCttTtt737737B.1.177.580.981358
S18L18FCttTtt721721B.1.177.50.895652
S18L18FCttTtt610610B.1.10.011066
S18L18FCttTtt578578A.270.956954
S18L18FCttTtt556556B.1.617.20.002094
S18L18FCttTtt517517B.1.177.800.988528
S18L18FCttTtt512512P.1.60.996109
S18L18FCttTtt453453AY.430.002007
S18L18FCttTtt427427B.1.177.791
S18L18FCttTtt387387B.1.1.3060.169662
S18L18FCttTtt363363B.1.177.630.981081
S18L18FCttTtt352352AY.1030.002186
S18L18FCttTtt324324AY.4.20.007027
S18L18FCttTtt317317B.1.177.480.990625
S18L18FCttTtt304304AY.270.019675
S18L18FCttTtt286286AY.250.00172
S18L18FCttTtt271271B.1.6100.960993
S18L18FCttTtt257258AY.440.001564
S18L18FCtTTtC1258AY.440.000006
S18L18FCttTtt257257U.30.992278
S18L18FCttTtt250250B.1.2790.128403
S18L18FCttTtt240240B.1.36.220.289855
S18L18FCttTtt208208P.1.80.995215
S18L18FCttTtt204204P.1.90.980769
S18L18FCttTtt189189AY.4.50.020316
S18L18FCttTtt189189B.1.360.027575
S18L18FCttTtt171171B.1.6260.977143
S18L18FCttTtt170170B.1.1600.005302
S18L18FCttTtt164164B.1.2390.200244
S18L18FCttTtt149149AY.30.001482
S18L18FCttTtt142142AY.750.007955
S18L18FCttTtt136136B.1.6360.912752
S18L18FCttTtt130130B.1.177.210.009941
S18L18FCttTtt128128B.1.177.670.977099
S18L18FCttTtt126126AY.1200.004685
S18L18FCttTtt122122AY.260.003454
S18L18FCttTtt113113U.20.991228
S18L18FCttTtt109109AY.420.004385
S18L18FCttTtt107107P.1.10.10.869919
S18L18FCttTtt100100B.1.1.2220.0204
S18L18FCttTtt9898P.1.111
S18L18FCttTtt9797AY.200.00377
S18L18FCttTtt9494B.1.1.2140.005213
S18L18FCttTtt9090AY.1020.002386
S18L18FCttTtt9090AY.390.002224
S18L18FCttTtt8585B.1.1.5190.003375
S18L18FCttTtt8484B.1.258.140.082353
S18L18FCttTtt8383AY.1190.002931
S18L18FCttTtt7575U.10.961538
S18L18FCttTtt6969AY.290.001088
S18L18FCttTtt6565B.1.177.680.984848
S18L18FCttTtt6464Q.10.008085
S18L18FCttTtt6161C.370.00708
S18L18FCttTtt5858B.1.177.590.935484
S18L18FCttTtt5757B.1.5960.004967
S18L18FCttTtt5454AY.1000.002484
S18L18FCttTtt5252B.1.1.280.016184
S18L18FCttTtt5151B.1.177.470.662338
S18L18FCttTtt5050B.1.4590.204082
S18L18FCttTtt4848AY.50.000991
S18L18FCttTtt4848B.1.2580.003194
S18L18FCttTtt4040B.1.36.290.020693
S18L18FCttTtt3737AY.98.10.001792
S18L18FCttTtt3737B.1.1.370.007136
S18L18FCttTtt3737B.1.6210.003275
S18L18FCttTtt3636B.1.1.1740.121622
S18L18FCttTtt3636B.1.1.3690.016064
S18L18FCttTtt3636B.1.4290.000847
S18L18FCttTtt3535AY.470.001089
S18L18FCttTtt3535B.1.2210.002486
S18L18FCttTtt3434B.1.5380.274194
S18L18FCttTtt3333AY.540.003146
S18L18FCttTtt3131B.1.177.430.04579
S18L18FCttTtt2929A.10.008174
S18L18FCttTtt2929B.1.6370.002119
S18L18FCttTtt2929P.1.31
S18L18FCttTtt2828B0.003579
S18L18FCttTtt2828B.1.1.500.019009
S18L18FCttTtt2727B.1.177.820.012888
S18L18FCttTtt2626AY.3.10.002217
S18L18FCttTtt2525B.1.1.3180.007544
S18L18FCttTtt2525B.1.5750.007585
S18L18FCttTtt2424B.1.177.440.012455
S18L18FCttTtt2424B.1.4650.091255
S18L18FCttTtt2424P.1.10.21
S18L18FCttTtt2323AY.70.004508
S18L18FCttTtt2323B.1.2400.004958
S18L18FCttTtt2121A0.008127
S18L18FCttTtt2121AY.46.40.003455
S18L18FCttTtt2121B.1.177.610.913043
S18L18FCttTtt2121B.1.177.660.875
S18L18FCttTtt2020B.1.2430.001392
S18L18FCttTtt2020B.1.5170.00854
S18L18FCttTtt1919B.1.1.3050.073359
S18L18FCttTtt1919B.1.36.380.031199
S18L18FCttTtt1818AY.1180.001128
S18L18FCttTtt1818B.1.6190.015679
S18L18FCttTtt1717AY.99.20.001567
S18L18FCttTtt1717B.1.1.4160.015385
S18L18FCttTtt1717B.1.5460.062963
S18L18FCttTtt1717B.1.5610.006749
S18L18FCttTtt1616AY.230.001116
S18L18FCttTtt1616AY.460.001665
S18L18FCttTtt1616AY.60.000658
S18L18FCttTtt1616B.1.2340.002111
S18L18FCttTtt1616B.1.258.170.001664
S18L18FCttTtt1616B.1.258.40.055172
S18L18FCttTtt1515AY.330.001002
S18L18FCttTtt1515B.1.1.630.005787
S18L18FCttTtt1515B.1.177.90.019973
S18L18FCttTtt1515B.1.36.180.006303
S18L18FCttTtt1515Q.80.002474
S18L18FCttTtt1414AY.1130.001993
S18L18FCttTtt1414AY.9.20.000514
S18L18FCttTtt1414B.1.4050.17284
S18L18FCttTtt1414B.1.5250.001584
S18L18FCttTtt1313B.1.1.2940.016456
S18L18FCttTtt1313B.1.1.3160.012026
S18L18FCttTtt1313B.1.1.5280.0625
S18L18FCttTtt1313B.1.6090.006232
S18L18FCttTtt1313B.1.617.10.001677
S18L18FCttTtt1313P.1.51
S18L18FCttTtt1313P.20.002426
S18L18FCttTtt1212B.1.3240.019262
S18L18FCttTtt1111B.1.177.641
S18L18FCttTtt1111B.1.177.810.002083
S18L18FCttTtt1111B.1.466.20.004304
S18L18FCttTtt1111B.1.619.10.007056
S18L18FCttTtt1010B.1.1.2770.007587
S18L18FCttTtt1010B.1.1.390.005097
S18L18FCttTtt1010B.1.177.730.005663
S18L18FCttTtt1010B.1.4270.000505
S18L18FCttTtt1010R.10.0009
S18L18FCttTtt99A.23.10.006338
S18L18FCttTtt99AY.450.001095
S18L18FCttTtt99AY.730.005988
S18L18FCttTtt99AY.880.007958
S18L18FCttTtt99B.1.1.10.00294
S18L18FCttTtt99B.1.258.90.045
S18L18FCttTtt99B.1.438.10.000965
S18L18FCttTtt99B.1.5240.012658
S18L18FCttTtt88AY.1070.003728
S18L18FCttTtt88AY.1090.005917
S18L18FCttTtt88AY.190.009122
S18L18FCttTtt88AY.39.10.000317
S18L18FCttTtt88AY.610.000838
S18L18FCttTtt88B.1.177.150.005047
S18L18FCttTtt88B.1.36.80.008
S18L18FCttTtt88B.1.3690.002282
S18L18FCttTtt88B.1.575.10.019512
S18L18FCttTtt88B.1.5950.002088
S18L18FCttTtt88B.4.10.150943
S18L18FCttTtt88C.160.008484
S18L18FCttTtt77AY.1060.002344
S18L18FCttTtt77AY.1210.000947
S18L18FCttTtt77AY.300.00277
S18L18FCttTtt77AY.4.2.10.001043
S18L18FCttTtt77AY.640.004167
S18L18FCttTtt77AY.980.000553
S18L18FCttTtt77B.1.1.3720.004821
S18L18FCttTtt77B.1.177.570.001967
S18L18FCttTtt77B.1.930.006536
S18L18FCttTtt77C.260.051471
S18L18FCttTtt77D.20.000525
S18L18FCttTtt77Q.30.001015
S18L18FCttTtt66AD.20.001314
S18L18FCttTtt66AY.1170.000507
S18L18FCttTtt66AY.140.000528
S18L18FCttTtt66AY.4.40.002455
S18L18FCttTtt66AY.5.30.002024
S18L18FCttTtt66AY.590.003178
S18L18FCttTtt66AY.75.10.001082
S18L18FCttTtt66AY.90.000406
S18L18FCttTtt66B.1.1.1610.021201
S18L18FCttTtt66B.1.1.2070.007092
S18L18FCttTtt66B.1.1.2190.03
S18L18FCttTtt66B.1.1.3110.002149
S18L18FCttTtt66B.1.1.3170.00247
S18L18FCttTtt66B.1.177.460.00551
S18L18FCttTtt66B.1.4000.002574
S18L18FCttTtt66B.1.4700.008427
S18L18FCttTtt66B.1.5820.002944
S18L18FCttTtt66W.40.008108
S18L18FCttTtt55AY.16.10.00235
S18L18FCttTtt55AY.620.002179
S18L18FCttTtt55AY.850.002136
S18L18FCttTtt55B.1.1.1890.007564
S18L18FCttTtt55B.1.1.2840.000537
S18L18FCttTtt55B.1.1.3260.008803
S18L18FCttTtt55B.1.1.330.002104
S18L18FCttTtt55B.1.1.3550.076923
S18L18FCttTtt55B.1.1.4340.001743
S18L18FCttTtt55B.1.1700.021552
S18L18FCttTtt55B.1.177.540.003032
S18L18FCttTtt55B.1.4620.036232
S18L18FCttTtt55B.1.5580.022831
S18L18FCttTtt55B.1.9.40.030675
S18L18FCttTtt44A.290.021277
S18L18FCttTtt44AE.80.001956
S18L18FCttTtt44AY.1050.002572
S18L18FCttTtt44AY.120.001264
S18L18FCttTtt44AY.120.20.005141
S18L18FCttTtt44AY.160.001519
S18L18FCttTtt44AY.340.000388
S18L18FCttTtt44AY.46.60.000289
S18L18FCttTtt44AY.5.40.001107
S18L18FCttTtt44AY.780.006163
S18L18FCttTtt44AY.9.10.000335
S18L18FCttTtt44AY.910.002922
S18L18FCttTtt44B.1.1.1410.008048
S18L18FCttTtt44B.1.1.3820.142857
S18L18FCttTtt44B.1.1.3880.181818
S18L18FCttTtt44B.1.177.310.045977
S18L18FCttTtt44B.1.177.40.000844
S18L18FCttTtt44B.1.177.560.00267
S18L18FCttTtt44B.1.36.100.019139
S18L18FCttTtt44B.1.4040.005208
S18L18FCttTtt44B.1.5200.086957
S18L18FCttTtt44B.1.5650.003241
S18L18FCttTtt44B.1.6200.003784
S18L18FCttTtt44C.350.003096
S18L18FCttTtt44C.37.10.010471
S18L18FCttTtt33AY.1110.000549
S18L18FCttTtt33AY.23.10.001252
S18L18FCttTtt33AY.320.001597
S18L18FCttTtt33AY.360.000445
S18L18FCttTtt33AY.490.009585
S18L18FCttTtt33AY.520.002443
S18L18FCttTtt33AY.630.001161
S18L18FCttTtt33AY.700.000626
S18L18FCttTtt33AY.710.001425
S18L18FCttTtt33AY.740.000347
S18L18FCttTtt33B.1.1.1980.004405
S18L18FCttTtt33B.1.1.2160.002671
S18L18FCttTtt33B.1.1.3480.002389
S18L18FCttTtt33B.1.1.4090.008499
S18L18FCttTtt33B.1.1.580.016129
S18L18FCttTtt33B.1.1.700.001023
S18L18FCttTtt33B.1.110.30.002155
S18L18FCttTtt33B.1.177.170.002463
S18L18FCttTtt33B.1.177.750.003122
S18L18FCttTtt33B.1.214.20.001799
S18L18FCttTtt33B.1.2360.00616
S18L18FCttTtt33B.1.3110.000824
S18L18FCttTtt33B.1.3560.005181
S18L18FCttTtt33B.1.36.170.001482
S18L18FCttTtt33B.1.36.390.006652
S18L18FCttTtt33B.1.3620.004622
S18L18FCttTtt33B.1.3750.002459
S18L18FCttTtt33B.1.416.10.004687
S18L18FCttTtt33B.1.4710.008197
S18L18FCttTtt33B.1.4970.000944
S18L18FCttTtt33B.1.5090.002597
S18L18FCttTtt33B.1.5600.013889
S18L18FCttTtt33B.1.6230.001609
S18L18FCttTtt33C.230.017442
S18L18FCttTtt33Z.10.008671
S18L18FCttTtt22A.20.001324
S18L18FCttTtt22A.2.50.000998
S18L18FCttTtt22AE.40.086957
S18L18FCttTtt22AE.60.076923
S18L18FCttTtt22AT.10.010256
S18L18FCttTtt22AU.10.002532
S18L18FCttTtt22AY.100.00106
S18L18FCttTtt22AY.1010.000981
S18L18FCttTtt22AY.110.002677
S18L18FCttTtt22AY.1100.000225
S18L18FCttTtt22AY.1140.000462
S18L18FCttTtt22AY.1160.000574
S18L18FCttTtt22AY.240.000862
S18L18FCttTtt22AY.29.10.000441
S18L18FCttTtt22AY.350.000466
S18L18FCttTtt22AY.400.001929
S18L18FCttTtt22AY.410.000588
S18L18FCttTtt22AY.46.30.001867
S18L18FCttTtt22AY.550.001835
S18L18FCttTtt22AY.670.000929
S18L18FCttTtt22AY.7.10.000225
S18L18FCttTtt22AY.890.009804
S18L18FCttTtt22AY.900.001369
S18L18FCttTtt22B.1.1.1760.000879
S18L18FCttTtt22B.1.1.2200.003717
S18L18FCttTtt22B.1.1.250.001137
S18L18FCttTtt22B.1.1.2540.022472
S18L18FCttTtt22B.1.1.2910.001485
S18L18FCttTtt22B.1.1.3090.011696
S18L18FCttTtt22B.1.1.3150.016949
S18L18FCttTtt22B.1.1.3220.017544
S18L18FCttTtt22B.1.1.3320.0625
S18L18FCttTtt22B.1.1.3350.025974
S18L18FCttTtt22B.1.1.3510.005587
S18L18FCttTtt22B.1.1.3660.031746
S18L18FCttTtt22B.1.1.3710.020833
S18L18FCttTtt22B.1.1.3750.02381
S18L18FCttTtt22B.1.1.3760.011905
S18L18FCttTtt22B.1.1.4320.002532
S18L18FCttTtt22B.1.1.440.004819
S18L18FCttTtt22B.1.1.5070.017391
S18L18FCttTtt22B.1.1.5120.057143
S18L18FCttTtt22B.1.1.830.00542
S18L18FCttTtt22B.1.1260.002551
S18L18FCttTtt22B.1.1470.001512
S18L18FCttTtt22B.1.1570.00597
S18L18FCttTtt22B.1.160.260.004843
S18L18FCttTtt22B.1.160.330.00885
S18L18FCttTtt22B.1.160.80.002577
S18L18FCttTtt22B.1.177.120.000303
S18L18FCttTtt22B.1.177.500.00939
S18L18FCttTtt22B.1.177.520.003515
S18L18FCttTtt22B.1.177.530.004785
S18L18FCttTtt22B.1.177.830.002963
S18L18FCttTtt22B.1.2320.001075
S18L18FCttTtt22B.1.258.110.000793
S18L18FCttTtt22B.1.258.220.005333
S18L18FCttTtt22B.1.2600.006689
S18L18FCttTtt22B.1.2840.026316
S18L18FCttTtt22B.1.3200.002491
S18L18FCttTtt22B.1.36.10.002281
S18L18FCttTtt22B.1.3890.002004
S18L18FCttTtt22B.1.4110.007407
S18L18FCttTtt22B.1.4170.057143
S18L18FCttTtt22B.1.5300.014286
S18L18FCttTtt22B.1.5540.008811
S18L18FCttTtt22B.1.5680.002222
S18L18FCttTtt22B.1.5760.001813
S18L18FCttTtt22B.1.617.30.00597
S18L18FCttTtt22C.320.046512
S18L18FCttTtt22N.60.014184
S18L18FCttTtt22Q.40.00091
S18L18FCttTtt22S.10.009901
S18L18FCttTtt11A.180.05
S18L18FCttTtt11A.2.20.001689
S18L18FCttTtt11A.2.5.10.004808
S18L18FCttTtt11A.2.5.20.001572
S18L18FCttTtt11A.210.00277
S18L18FCttTtt11AA.20.007692
S18L18FCttTtt11AA.70.009174
S18L18FCttTtt11AH.30.003802
S18L18FCttTtt11AK.10.012658
S18L18FCttTtt11AY.120.10.000321
S18L18FCttTtt11AY.130.000161
S18L18FCttTtt11AY.280.00189
S18L18FCttTtt11AY.34.10.00051
S18L18FCttTtt11AY.4.10.000737
S18L18FCttTtt11AY.46.10.001027
S18L18FCttTtt11AY.46.20.000635
S18L18FCttTtt11AY.46.50.000198
S18L18FCttTtt11AY.5.20.002463
S18L18FCttTtt11AY.560.001605
S18L18FCttTtt11AY.570.000656
S18L18FCttTtt11AY.580.000907
S18L18FCttTtt11AY.660.00107
S18L18FCttTtt11AY.680.000274
S18L18FCttTtt11AY.690.000187
S18L18FCttTtt11AY.760.004831
S18L18FCttTtt11AY.770.001127
S18L18FCttTtt11AY.840.000437
S18L18FCttTtt11AY.920.000287
S18L18FCttTtt11AY.940.000443
S18L18FCttTtt11AY.990.001049
S18L18FCttTtt11AZ.20.000821
S18L18FCttTtt11AZ.30.00152
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