CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = K417T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S417K417TnonsynaAgaCg1109871109080.99928822811-22813
S417K417TnonsynaAGaCA110987690.00062169422811-22813
S417K417TnonsynaAGaCT110987100.000090100622811-22813

Details of the mutation K417T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S417K417TaAgaCg110908110987All0.021212
S417K417TaAGaCA69110987All0.000013
S417K417TaAGaCT10110987All0.000002
S417K417TaAgaCg6134061350P.10.966349
S417K417TaAGaCT761350P.10.00011
S417K417TaAGaCA361350P.10.000047
S417K417TaAgaCg2010620108P.1.140.96109
S417K417TaAGaCA220108P.1.140.000096
S417K417TaAgaCg58665928P.1.170.948884
S417K417TaAGaCA615928P.1.170.009867
S417K417TaAGaCT15928P.1.170.000162
S417K417TaAgaCg40744074P.1.150.946561
S417K417TaAgaCg36533653P.1.100.984371
S417K417TaAgaCg30663066P.1.70.978927
S417K417TaAgaCg29212924P.1.10.927891
S417K417TaAGaCA32924P.1.10.000953
S417K417TaAgaCg25052505P.1.160.937149
S417K417TaAgaCg18801880P.1.120.909971
S417K417TaAgaCg11281128P.1.17.10.986877
S417K417TaAgaCg10791079P.1.130.969452
S417K417TaAgaCg10241024P.1.41
S417K417TaAgaCg828828P.1.20.957225
S417K417TaAgaCg514514P.1.61
S417K417TaAgaCg209209P.1.81
S417K417TaAgaCg198198P.1.90.951923
S417K417TaAgaCg123123P.1.10.11
S417K417TaAgaCg9898P.1.111
S417K417TaAgaCg5353B.1.617.20.0002
S417K417TaAgaCg4040B.10.000366
S417K417TaAgaCg3838B.1.10.000689
S417K417TaAgaCg2929P.1.31
S417K417TaAgaCg2424B.1.1.70.000021
S417K417TaAgaCg1919A.2.50.009481
S417K417TaAgaCg1919C.370.002205
S417K417TaAgaCg1414P.1.10.20.583333
S417K417TaAgaCg1313P.1.51
S417K417TaAgaCg55AY.40.000008
S417K417TaAgaCg44C.37.10.010471
S417K417TaAgaCg44P.20.000747
S417K417TaAgaCg33AY.230.000209
S417K417TaAgaCg33B.1.1.280.000934
S417K417TaAgaCg33B.1.6210.000266
S417K417TaAgaCg22AY.250.000012
S417K417TaAgaCg22AY.75.10.000361
S417K417TaAGaCT22B.1.3510.000059
S417K417TaAgaCg11AY.1020.000027
S417K417TaAgaCg11AY.1190.000035
S417K417TaAgaCg11AY.390.000025
S417K417TaAgaCg11AY.430.000004
S417K417TaAgaCg11AY.440.000006
S417K417TaAgaCg11AY.450.000122
S417K417TaAgaCg11B.1.1.2360.006897
S417K417TaAgaCg11B.1.1.3720.000689
S417K417TaAgaCg11B.1.1.4090.002833
S417K417TaAgaCg11B.1.1.5280.004808
S417K417TaAgaCg11B.1.1770.000013
S417K417TaAgaCg11B.1.177.730.000566
S417K417TaAgaCg11B.1.2210.000071
S417K417TaAgaCg11B.1.3490.000715
S417K417TaAgaCg11B.1.5260.000024
S417K417TaAgaCg11B.1.5960.000087
S417K417TaAgaCg11B.1.6230.000536
S417K417TaAgaCg11B.1.6270.00202
S417K417TaAgaCg11C.350.000774
S417K417TaAgaCg11C.36.30.000567
S417K417TaAgaCg11Q.10.000126