CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = H69del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S69H69deldelCAT---11573391157339121767-21769

Details of the mutation H69del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S69H69delCAT---11573391157339All0.221355
S69H69delCAT---10833881083388B.1.1.70.969874
S69H69delCAT---1028510285B.1.2580.684435
S69H69delCAT---91429142B.1.258.170.950509
S69H69delCAT---82758275B.1.5250.936404
S69H69delCAT---77407740Q.10.977767
S69H69delCAT---66556655Q.30.965192
S69H69delCAT---59765976Q.80.985488
S69H69delCAT---24582458B.1.258.110.974237
S69H69delCAT---21642164B.1.10.039257
S69H69delCAT---21222122Q.40.964984
S69H69delCAT---14351435Q.20.880368
S69H69delCAT---13571357C.36.30.769711
S69H69delCAT---13161316B.10.012054
S69H69delCAT---11831183B.1.3750.969672
S69H69delCAT---10541054B.1.6200.997162
S69H69delCAT---10311031B.1.1.2980.888793
S69H69delCAT---893893Q.70.992222
S69H69delCAT---548548AY.440.003336
S69H69delCAT---518518B.1.258.70.99044
S69H69delCAT---469469AY.430.002078
S69H69delCAT---385385B.1.617.20.00145
S69H69delCAT---373373B.1.258.220.994667
S69H69delCAT---352352C.370.040854
S69H69delCAT---347347A.280.917989
S69H69delCAT---333333B.1.6250.783529
S69H69delCAT---292292AY.40.000454
S69H69delCAT---289289B.1.258.40.996552
S69H69delCAT---286286AY.250.00172
S69H69delCAT---274274B.1.6340.938356
S69H69delCAT---269269B.1.4290.006329
S69H69delCAT---260260C.36.3.10.706522
S69H69delCAT---200200B.1.258.91
S69H69delCAT---185185AY.1030.001149
S69H69delCAT---171171AY.30.001701
S69H69delCAT---167167B.1.4270.008433
S69H69delCAT---166166B.1.5760.150499
S69H69delCAT---161161P.10.002536
S69H69delCAT---150150B.1.20.001321
S69H69delCAT---150150Q.60.993377
S69H69delCAT---147147AY.230.010253
S69H69delCAT---141141B.1.258.191
S69H69delCAT---129129B.1.415.10.977273
S69H69delCAT---128128B.1.258.210.992248
S69H69delCAT---125125AY.360.018527
S69H69delCAT---123123B.1.258.120.968504
S69H69delCAT---113113B.1.258.50.991228
S69H69delCAT---111111B.1.1.700.037858
S69H69delCAT---104104B.1.1770.001369
S69H69delCAT---8787AY.260.002463
S69H69delCAT---8484B.1.258.100.954545
S69H69delCAT---8282AY.390.002026
S69H69delCAT---7777AY.420.003098
S69H69delCAT---7676B.1.1600.00237
S69H69delCAT---6969P.1.10.10.560976
S69H69delCAT---6767AY.9.20.002461
S69H69delCAT---6464B.1.5960.005577
S69H69delCAT---6363AY.1020.00167
S69H69delCAT---6363B.1.1.2050.234201
S69H69delCAT---6161B.1.258.200.968254
S69H69delCAT---6060R.10.005401
S69H69delCAT---5959Q.51
S69H69delCAT---5656B.1.6090.026846
S69H69delCAT---5555B.1.617.10.007093
S69H69delCAT---5151AY.1090.037722
S69H69delCAT---5050B.1.258.60.980392
S69H69delCAT---4949B.1.2210.003481
S69H69delCAT---4747B.1.5260.001105
S69H69delCAT---4545AY.90.003042
S69H69delCAT---4545B0.005752
S69H69delCAT---4545XA1
S69H69delCAT---4444AY.750.002465
S69H69delCAT---4141AY.610.004296
S69H69delCAT---4141B.1.258.230.97619
S69H69delCAT---4141B.1.6390.891304
S69H69delCAT---4040AY.50.000826
S69H69delCAT---3737AY.460.003851
S69H69delCAT---3636AY.470.00112
S69H69delCAT---3636B.1.6370.002631
S69H69delCAT---3636P.1.10.011436
S69H69delCAT---3535AY.75.10.006311
S69H69delCAT---3535B.1.1.4090.09915
S69H69delCAT---3434AY.1000.001564
S69H69delCAT---3232AY.530.009201
S69H69delCAT---3232AY.99.20.002949
S69H69delCAT---3131AY.1180.001942
S69H69delCAT---3131AY.980.002449
S69H69delCAT---3131C.360.028233
S69H69delCAT---2929AY.4.50.003117
S69H69delCAT---2929B.1.258.240.311828
S69H69delCAT---2828AY.1170.002366
S69H69delCAT---2828B.1.1.5190.001112
S69H69delCAT---2626AY.98.10.001259
S69H69delCAT---2424AY.650.012793
S69H69delCAT---2323B.1.1.1610.081272
S69H69delCAT---2323B.1.6210.002036
S69H69delCAT---2020AY.34.10.010199
S69H69delCAT---2020AY.450.002434
S69H69delCAT---2020B.1.3510.000595
S69H69delCAT---1818A0.006966
S69H69delCAT---1818B.1.1.2220.003672
S69H69delCAT---1717AY.200.000661
S69H69delCAT---1717AY.300.006727
S69H69delCAT---1717AY.520.013844
S69H69delCAT---1616AY.700.003336
S69H69delCAT---1616AY.920.004596
S69H69delCAT---1616B.1.1.370.003086
S69H69delCAT---1616B.1.1.5070.13913
S69H69delCAT---1616P.1.120.007744
S69H69delCAT---1515AY.16.10.007049
S69H69delCAT---1515AY.340.001454
S69H69delCAT---1515AY.540.00143
S69H69delCAT---1515B.1.1.250.008528
S69H69delCAT---1414AY.1190.000494
S69H69delCAT---1414AY.46.60.001011
S69H69delCAT---1414B.1.1.2200.026022
S69H69delCAT---1414B.1.258.140.013725
S69H69delCAT---1313AY.350.00303
S69H69delCAT---1313B.1.1.3120.024857
S69H69delCAT---1212AY.910.008766
S69H69delCAT---1111AY.3.10.000938
S69H69delCAT---1111AY.330.000735
S69H69delCAT---1111AY.680.003011
S69H69delCAT---1111AY.9.10.000921
S69H69delCAT---1111B.1.1.2940.013924
S69H69delCAT---1111B.1.177.860.002018
S69H69delCAT---1111B.1.4110.040741
S69H69delCAT---1010AY.160.003797
S69H69delCAT---1010AY.39.10.000396
S69H69delCAT---1010AY.400.009643
S69H69delCAT---1010B.1.1.5280.048077
S69H69delCAT---1010B.1.258.181
S69H69delCAT---99AY.1130.001282
S69H69delCAT---99AY.1210.001218
S69H69delCAT---99AY.850.003845
S69H69delCAT---99B.1.3880.818182
S69H69delCAT---880.444444
S69H69delCAT---88AY.1010.003923
S69H69delCAT---88AY.710.0038
S69H69delCAT---88AY.740.000925
S69H69delCAT---88B.1.1.500.005431
S69H69delCAT---88B.1.3110.002197
S69H69delCAT---88B.1.3670.006339
S69H69delCAT---88B.1.6230.004292
S69H69delCAT---77AY.10.00277
S69H69delCAT---77AY.690.001307
S69H69delCAT---77AY.940.003099
S69H69delCAT---77AY.990.007345
S69H69delCAT---77B.1.1.280.002179
S69H69delCAT---77B.1.1.5230.010937
S69H69delCAT---77B.1.2430.000487
S69H69delCAT---77B.1.3930.2
S69H69delCAT---77B.4.10.132075
S69H69delCAT---66AY.1050.003859
S69H69delCAT---66AY.1060.002009
S69H69delCAT---66AY.5.30.002024
S69H69delCAT---66AY.560.009631
S69H69delCAT---66B.1.1.10.00196
S69H69delCAT---66B.1.1.1410.012072
S69H69delCAT---66B.1.1.3170.00247
S69H69delCAT---66B.1.1.3180.001811
S69H69delCAT---66B.1.1570.01791
S69H69delCAT---66B.1.177.310.068966
S69H69delCAT---66B.1.5640.002555
S69H69delCAT---66P.1.150.001394
S69H69delCAT---66P.1.160.002245
S69H69delCAT---55AY.1100.000563
S69H69delCAT---55AY.120.00158
S69H69delCAT---55AY.140.00044
S69H69delCAT---55AY.240.002155
S69H69delCAT---55AY.380.002496
S69H69delCAT---55AY.39.20.007704
S69H69delCAT---55AY.5.40.001384
S69H69delCAT---55AY.550.004587
S69H69delCAT---55AY.590.002648
S69H69delCAT---55AY.60.000206
S69H69delCAT---55AY.7.20.002796
S69H69delCAT---55B.1.1390.003666
S69H69delCAT---55B.1.360.00073
S69H69delCAT---55B.1.5540.022026
S69H69delCAT---55B.1.5750.001517
S69H69delCAT---55B.1.5800.020325
S69H69delCAT---55B.1.5990.018248
S69H69delCAT---55B.1.6280.001762
S69H69delCAT---44A.2.50.001996
S69H69delCAT---44A.250.072727
S69H69delCAT---44AY.1200.000149
S69H69delCAT---44AY.130.000644
S69H69delCAT---44AY.210.00759
S69H69delCAT---44AY.290.000063
S69H69delCAT---44AY.29.10.000882
S69H69delCAT---44AY.4.20.000087
S69H69delCAT---44AY.4.2.10.000596
S69H69delCAT---44AY.46.50.000794
S69H69delCAT---44AY.950.003044
S69H69delCAT---44B.1.1.100.004459
S69H69delCAT---44B.1.1.4200.004024
S69H69delCAT---44B.1.1.4340.001394
S69H69delCAT---44B.1.1.4480.00813
S69H69delCAT---44B.1.1080.023256
S69H69delCAT---44B.1.36.80.004
S69H69delCAT---44B.1.466.20.001565
S69H69delCAT---44B.1.6190.003484
S69H69delCAT---44B.1.621.10.002023
S69H69delCAT---44P.1.70.001277
S69H69delCAT---33AD.20.000657
S69H69delCAT---33AY.1110.000549
S69H69delCAT---33AY.120.2.10.001495
S69H69delCAT---33AY.370.000948
S69H69delCAT---33AY.670.001393
S69H69delCAT---33AY.970.005102
S69H69delCAT---33B.1.1.1530.003286
S69H69delCAT---33B.1.1.2160.002671
S69H69delCAT---33B.1.1.3060.001315
S69H69delCAT---33B.1.1.3150.025424
S69H69delCAT---33B.1.1.3720.002066
S69H69delCAT---33B.1.1.390.001529
S69H69delCAT---33B.1.1.5250.016393
S69H69delCAT---33B.1.177.810.000568
S69H69delCAT---33B.1.2140.010989
S69H69delCAT---33B.1.2340.000396
S69H69delCAT---33B.1.2370.014925
S69H69delCAT---33B.1.2390.003663
S69H69delCAT---33B.1.258.150.056604
S69H69delCAT---33B.1.36.380.004926
S69H69delCAT---33B.1.3690.000856
S69H69delCAT---33B.1.4700.004213
S69H69delCAT---33B.1.5330.028846
S69H69delCAT---33B.1.5650.002431
S69H69delCAT---33B.1.6000.017544
S69H69delCAT---33B.1.6330.125
S69H69delCAT---33B.1.6360.020134
S69H69delCAT---33B.520.030303
S69H69delCAT---33P.1.100.000808
S69H69delCAT---33P.1.170.000485
S69H69delCAT---33P.1.60.005837
S69H69delCAT---22AY.100.00106
S69H69delCAT---22AY.1070.000932
S69H69delCAT---22AY.1080.002205
S69H69delCAT---22AY.1140.000462
S69H69delCAT---22AY.190.002281
S69H69delCAT---22AY.320.001065
S69H69delCAT---22AY.4.40.000818
S69H69delCAT---22AY.620.000871
S69H69delCAT---22AY.640.00119
S69H69delCAT---22AY.720.002721
S69H69delCAT---22AY.810.003984
S69H69delCAT---22AY.880.001768
S69H69delCAT---22B.1.1.1480.017544
S69H69delCAT---22B.1.1.1660.066667
S69H69delCAT---22B.1.1.2410.004141
S69H69delCAT---22B.1.1.2910.001485
S69H69delCAT---22B.1.1.2990.02439
S69H69delCAT---22B.1.1.340.026316
S69H69delCAT---22B.1.1.3700.025316
S69H69delCAT---22B.1.1.5240.041667
S69H69delCAT---22B.1.1.830.00542
S69H69delCAT---22B.1.1110.00235
S69H69delCAT---22B.1.1700.008621
S69H69delCAT---22B.1.177.210.000153
S69H69delCAT---22B.1.177.440.001038
S69H69delCAT---22B.1.177.60.001953
S69H69delCAT---22B.1.177.70.00033
S69H69delCAT---22B.1.177.730.001133
S69H69delCAT---22B.1.1790.007519
S69H69delCAT---22B.1.214.20.001199
S69H69delCAT---22B.1.220.002635
S69H69delCAT---22B.1.258.30.00335
S69H69delCAT---22B.1.3360.004878
S69H69delCAT---22B.1.3800.013245
S69H69delCAT---22B.1.4680.011429
S69H69delCAT---22B.1.5820.000981
S69H69delCAT---22B.1.5900.009091
S69H69delCAT---22B.1.940.054054
S69H69delCAT---22B.6.60.001778
S69H69delCAT---22C.350.001548
S69H69delCAT---22C.390.037736
S69H69delCAT---11A.2.5.10.004808
S69H69delCAT---11A.23.10.000704
S69H69delCAT---11AY.110.001339
S69H69delCAT---11AY.1150.005208
S69H69delCAT---11AY.116.10.000311
S69H69delCAT---11AY.120.10.000321
S69H69delCAT---11AY.120.20.001285
S69H69delCAT---11AY.170.008197
S69H69delCAT---11AY.4.10.000737
S69H69delCAT---11AY.4.30.000842
S69H69delCAT---11AY.46.40.000165
S69H69delCAT---11AY.5.10.003759
S69H69delCAT---11AY.510.000909
S69H69delCAT---11AY.580.000907
S69H69delCAT---11AY.600.000938
S69H69delCAT---11AY.630.000387
S69H69delCAT---11AY.70.000196
S69H69delCAT---11AY.730.000665
S69H69delCAT---11AY.770.001127
S69H69delCAT---11AY.830.001724
S69H69delCAT---11AY.840.000437
S69H69delCAT---11AY.860.00083
S69H69delCAT---11AY.870.000833
S69H69delCAT---11AY.91.10.004065
S69H69delCAT---11AZ.20.000821
S69H69delCAT---11AZ.30.00152
S69H69delCAT---11B.1.1.1180.010204
S69H69delCAT---11B.1.1.1340.011364
S69H69delCAT---11B.1.1.1350.004695
S69H69delCAT---11B.1.1.1590.004673
S69H69delCAT---11B.1.1.1600.02381
S69H69delCAT---11B.1.1.1710.003676
S69H69delCAT---11B.1.1.1870.00885
S69H69delCAT---11B.1.1.1890.001513
S69H69delCAT---11B.1.1.2310.003096
S69H69delCAT---11B.1.1.2370.005405
S69H69delCAT---11B.1.1.2540.011236
S69H69delCAT---11B.1.1.2650.003155
S69H69delCAT---11B.1.1.3110.000358
S69H69delCAT---11B.1.1.3480.000796
S69H69delCAT---11B.1.1.3510.002793
S69H69delCAT---11B.1.1.3740.002375
S69H69delCAT---11B.1.1.3750.011905
S69H69delCAT---11B.1.1.3880.045455
S69H69delCAT---11B.1.1.3890.006061
S69H69delCAT---11B.1.1.3970.002252
S69H69delCAT---11B.1.1.4160.000905
S69H69delCAT---11B.1.1.4170.002703
S69H69delCAT---11B.1.1.440.00241
S69H69delCAT---11B.1.1.4590.015385
S69H69delCAT---11B.1.1.4620.008621
S69H69delCAT---11B.1.1.550.012987
S69H69delCAT---11B.1.1.620.027027
S69H69delCAT---11B.1.1.630.000386
S69H69delCAT---11B.1.1.710.006061
S69H69delCAT---11B.1.1.990.02381
S69H69delCAT---11B.1.1260.001276
S69H69delCAT---11B.1.1280.000635
S69H69delCAT---11B.1.1400.018868
S69H69delCAT---11B.1.160.140.002119
S69H69delCAT---11B.1.160.160.000929
S69H69delCAT---11B.1.160.320.004292
S69H69delCAT---11B.1.177.150.000631
S69H69delCAT---11B.1.177.160.000664
S69H69delCAT---11B.1.177.170.000821
S69H69delCAT---11B.1.177.180.00116
S69H69delCAT---11B.1.177.330.001645
S69H69delCAT---11B.1.177.40.000211
S69H69delCAT---11B.1.177.400.005155
S69H69delCAT---11B.1.177.450.000381
S69H69delCAT---11B.1.177.490.037037
S69H69delCAT---11B.1.177.510.004566
S69H69delCAT---11B.1.177.560.000668
S69H69delCAT---11B.1.177.750.001041
S69H69delCAT---11B.1.177.770.000726
S69H69delCAT---11B.1.177.830.001481
S69H69delCAT---11B.1.1990.004132
S69H69delCAT---11B.1.214.30.007143
S69H69delCAT---11B.1.2400.000216
S69H69delCAT---11B.1.2410.000812
S69H69delCAT---11B.1.2420.018868
S69H69delCAT---11B.1.258.160.001637
S69H69delCAT---11B.1.2600.003344
S69H69delCAT---11B.1.3240.001605
S69H69delCAT---11B.1.351.30.000876
S69H69delCAT---11B.1.36.100.004785
S69H69delCAT---11B.1.36.220.001208
S69H69delCAT---11B.1.3610.001289
S69H69delCAT---11B.1.3620.001541
S69H69delCAT---11B.1.3820.008929
S69H69delCAT---11B.1.3910.001127
S69H69delCAT---11B.1.3990.001934
S69H69delCAT---11B.1.4000.000429
S69H69delCAT---11B.1.4060.006061
S69H69delCAT---11B.1.416.10.001563
S69H69delCAT---11B.1.4320.011236
S69H69delCAT---11B.1.4330.003195
S69H69delCAT---11B.1.438.10.000107
S69H69delCAT---11B.1.4410.009615
S69H69delCAT---11B.1.4460.02
S69H69delCAT---11B.1.4620.007246
S69H69delCAT---11B.1.4690.00361
S69H69delCAT---11B.1.4970.000315
S69H69delCAT---11B.1.4990.00105
S69H69delCAT---11B.1.5600.00463
S69H69delCAT---11B.1.5610.000397
S69H69delCAT---11B.1.5680.001111
S69H69delCAT---11B.1.5950.000261
S69H69delCAT---11B.1.617.30.002985
S69H69delCAT---11B.1.6310.003367
S69H69delCAT---11B.1.780.008547
S69H69delCAT---11B.1.810.021277
S69H69delCAT---11B.1.9.50.005682
S69H69delCAT---11B.280.003279
S69H69delCAT---11B.550.00295
S69H69delCAT---11C.160.00106
S69H69delCAT---11C.260.007353
S69H69delCAT---11L.30.003546
S69H69delCAT---11N.50.001767
S69H69delCAT---11P.1.130.000898
S69H69delCAT---11P.20.000187
S69H69delCAT---11P.60.003145
S69H69delCAT---11W.20.004831