CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = H66P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S66H66PnonsyncAtcCt90840.93333321758-21760
S66H66PnonsyncATcCG9050.055555621758-21760
S66H66PnonsyncATcCC9010.011111121758-21760

Details of the mutation H66P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S66H66PcAtcCt8490All0.000016
S66H66PcATcCG590All0.000001
S66H66PcATcCC190All0
S66H66PcAtcCt5656AY.390.001384
S66H66PcAtcCt55B.1.1.70.000004
S66H66PcAtcCt24P.10.000032
S66H66PcATcCG24P.10.000032
S66H66PcAtcCt330.166667
S66H66PcAtcCt13AY.30.00001
S66H66PcATcCG13AY.30.00001
S66H66PcATcCC13AY.30.00001
S66H66PcAtcCt22AY.250.000012
S66H66PcAtcCt22AY.40.000003
S66H66PcATcCG12B.1.1.280.000311
S66H66PcAtcCt12B.1.1.280.000311
S66H66PcAtcCt22B.1.258.70.003824
S66H66PcAtcCt22B.1.4290.000047
S66H66PcATcCG12P.20.000187
S66H66PcAtcCt12P.20.000187
S66H66PcAtcCt11AY.1030.000006
S66H66PcAtcCt11AY.1190.000035
S66H66PcAtcCt11AY.230.00007
S66H66PcAtcCt11AY.4.50.000107
S66H66PcAtcCt11AY.430.000004
S66H66PcAtcCt11B.1.4270.00005
S66H66PcAtcCt11B.1.5960.000087