CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 146 | H146H | syn | caC | caT | 13133 | 13133 | 1 | 21998-22000 |
Details of the mutation H146H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 146 | H146H | caC | caT | 13133 | 13133 | All | 0.002512 |
S | 146 | H146H | caC | caT | 3922 | 3922 | AY.4 | 0.006104 |
S | 146 | H146H | caC | caT | 2098 | 2098 | AY.4.4 | 0.858429 |
S | 146 | H146H | caC | caT | 1972 | 1972 | B.1.1.7 | 0.001765 |
S | 146 | H146H | caC | caT | 1368 | 1368 | A.23.1 | 0.96338 |
S | 146 | H146H | caC | caT | 390 | 390 | AY.25 | 0.002346 |
S | 146 | H146H | caC | caT | 308 | 308 | B.1.617.2 | 0.00116 |
S | 146 | H146H | caC | caT | 201 | 201 | B.1.2 | 0.00177 |
S | 146 | H146H | caC | caT | 192 | 192 | AY.43 | 0.000851 |
S | 146 | H146H | caC | caT | 166 | 166 | AY.44 | 0.00101 |
S | 146 | H146H | caC | caT | 121 | 121 | AY.20 | 0.004703 |
S | 146 | H146H | caC | caT | 110 | 110 | AY.119 | 0.003884 |
S | 146 | H146H | caC | caT | 100 | 100 | AY.6 | 0.004113 |
S | 146 | H146H | caC | caT | 94 | 94 | A.23 | 0.989474 |
S | 146 | H146H | caC | caT | 93 | 93 | AY.103 | 0.000577 |
S | 146 | H146H | caC | caT | 84 | 84 | B.1.131 | 0.736842 |
S | 146 | H146H | caC | caT | 82 | 82 | AY.3 | 0.000816 |
S | 146 | H146H | caC | caT | 82 | 82 | B.1 | 0.000751 |
S | 146 | H146H | caC | caT | 79 | 79 | B.1.177 | 0.00104 |
S | 146 | H146H | caC | caT | 75 | 75 | AY.9.2 | 0.002755 |
S | 146 | H146H | caC | caT | 74 | 74 | P.1 | 0.001166 |
S | 146 | H146H | caC | caT | 52 | 52 | B.1.1 | 0.000943 |
S | 146 | H146H | caC | caT | 49 | 49 | B.1.369 | 0.013976 |
S | 146 | H146H | caC | caT | 43 | 43 | AY.102 | 0.00114 |
S | 146 | H146H | caC | caT | 38 | 38 | B.1.1.519 | 0.001509 |
S | 146 | H146H | caC | caT | 37 | 37 | AY.39 | 0.000914 |
S | 146 | H146H | caC | caT | 34 | 34 | P.2 | 0.006346 |
S | 146 | H146H | caC | caT | 32 | 32 | B.1.1.270 | 0.329897 |
S | 146 | H146H | caC | caT | 30 | 30 | B.1.1.70 | 0.010232 |
S | 146 | H146H | caC | caT | 29 | 29 | B.1.526 | 0.000682 |
S | 146 | H146H | caC | caT | 28 | 28 | AY.42 | 0.001126 |
S | 146 | H146H | caC | caT | 27 | 27 | AY.29 | 0.000426 |
S | 146 | H146H | caC | caT | 25 | 25 | AY.4.2 | 0.000542 |
S | 146 | H146H | caC | caT | 25 | 25 | B.1.258 | 0.001664 |
S | 146 | H146H | caC | caT | 24 | 24 | B.1.240 | 0.005174 |
S | 146 | H146H | caC | caT | 24 | 24 | B.1.429 | 0.000565 |
S | 146 | H146H | caC | caT | 23 | 23 | B.1.427 | 0.001161 |
S | 146 | H146H | caC | caT | 23 | 23 | B.1.617.1 | 0.002966 |
S | 146 | H146H | caC | caT | 21 | 21 | AY.5 | 0.000434 |
S | 146 | H146H | caC | caT | 20 | 20 | AY.4.5 | 0.00215 |
S | 146 | H146H | caC | caT | 20 | 20 | B.1.474 | 0.038023 |
S | 146 | H146H | caC | caT | 19 | 19 | AY.100 | 0.000874 |
S | 146 | H146H | caC | caT | 19 | 19 | AY.23 | 0.001325 |
S | 146 | H146H | caC | caT | 19 | 19 | B.1.1.111 | 0.279412 |
S | 146 | H146H | caC | caT | 18 | 18 | B.1.351 | 0.000535 |
S | 146 | H146H | caC | caT | 17 | 17 | AY.29.1 | 0.003749 |
S | 146 | H146H | caC | caT | 17 | 17 | C.37 | 0.001973 |
S | 146 | H146H | caC | caT | 16 | 16 | AY.47 | 0.000498 |
S | 146 | H146H | caC | caT | 15 | 15 | AY.57 | 0.009843 |
S | 146 | H146H | caC | caT | 14 | 14 | AY.113 | 0.001993 |
S | 146 | H146H | caC | caT | 14 | 14 | AY.54 | 0.001335 |
S | 146 | H146H | caC | caT | 14 | 14 | B.1.400 | 0.006006 |
S | 146 | H146H | caC | caT | 13 | 13 | AY.26 | 0.000368 |
S | 146 | H146H | caC | caT | 13 | 13 | B.1.1.222 | 0.002652 |
S | 146 | H146H | caC | caT | 13 | 13 | B.1.160 | 0.000405 |
S | 146 | H146H | caC | caT | 13 | 13 | B.1.234 | 0.001715 |
S | 146 | H146H | caC | caT | 12 | 12 | B.1.1.189 | 0.018154 |
S | 146 | H146H | caC | caT | 12 | 12 | B.1.1.214 | 0.000665 |
S | 146 | H146H | caC | caT | 12 | 12 | B.1.258.16 | 0.01964 |
S | 146 | H146H | caC | caT | 12 | 12 | C.36.3 | 0.006807 |
S | 146 | H146H | caC | caT | 11 | 11 | P.1.2 | 0.012717 |
S | 146 | H146H | caC | caT | 10 | 10 | A | 0.00387 |
S | 146 | H146H | caC | caT | 10 | 10 | AY.120 | 0.000372 |
S | 146 | H146H | caC | caT | 10 | 10 | B.1.36.24 | 0.061728 |
S | 146 | H146H | caC | caT | 10 | 10 | B.1.396 | 0.007057 |
S | 146 | H146H | caC | caT | 10 | 10 | B.1.525 | 0.001132 |
S | 146 | H146H | caC | caT | 10 | 10 | D.2 | 0.00075 |
S | 146 | H146H | caC | caT | 9 | 9 | AY.46.6 | 0.00065 |
S | 146 | H146H | caC | caT | 9 | 9 | B.1.1.384 | 0.214286 |
S | 146 | H146H | caC | caT | 9 | 9 | B.1.1.50 | 0.00611 |
S | 146 | H146H | caC | caT | 9 | 9 | B.1.36 | 0.001313 |
S | 146 | H146H | caC | caT | 9 | 9 | P.1.15 | 0.002091 |
S | 146 | H146H | caC | caT | 9 | 9 | Q.1 | 0.001137 |
S | 146 | H146H | caC | caT | 8 | 8 | AY.111 | 0.001465 |
S | 146 | H146H | caC | caT | 8 | 8 | AY.75.1 | 0.001442 |
S | 146 | H146H | caC | caT | 8 | 8 | B.1.346 | 0.010485 |
S | 146 | H146H | caC | caT | 8 | 8 | Q.8 | 0.001319 |
S | 146 | H146H | caC | caT | 7 | 7 | AY.23.1 | 0.002922 |
S | 146 | H146H | caC | caT | 7 | 7 | B.1.1.417 | 0.018919 |
S | 146 | H146H | caC | caT | 7 | 7 | B.1.111 | 0.008226 |
S | 146 | H146H | caC | caT | 7 | 7 | B.1.517 | 0.002989 |
S | 146 | H146H | caC | caT | 7 | 7 | B.1.621 | 0.00062 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.33 | 0.000401 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.45 | 0.00073 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.46 | 0.000624 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.58 | 0.005445 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.75 | 0.000336 |
S | 146 | H146H | caC | caT | 6 | 6 | AY.99.2 | 0.000553 |
S | 146 | H146H | caC | caT | 6 | 6 | B.1.1.33 | 0.002525 |
S | 146 | H146H | caC | caT | 6 | 6 | B.1.1.521 | 0.032086 |
S | 146 | H146H | caC | caT | 6 | 6 | B.1.596 | 0.000523 |
S | 146 | H146H | caC | caT | 6 | 6 | B.1.628 | 0.002114 |
S | 146 | H146H | caC | caT | 6 | 6 | P.1.14 | 0.000287 |
S | 146 | H146H | caC | caT | 5 | 5 | AY.118 | 0.000313 |
S | 146 | H146H | caC | caT | 5 | 5 | AY.30 | 0.001979 |
S | 146 | H146H | caC | caT | 5 | 5 | AY.63 | 0.001934 |
S | 146 | H146H | caC | caT | 5 | 5 | AY.9 | 0.000338 |
S | 146 | H146H | caC | caT | 5 | 5 | AY.92 | 0.001436 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.1.316 | 0.004625 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.177.4 | 0.001055 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.243 | 0.000348 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.258.17 | 0.00052 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.524 | 0.007032 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.561 | 0.001985 |
S | 146 | H146H | caC | caT | 5 | 5 | B.1.575 | 0.001517 |
S | 146 | H146H | caC | caT | 5 | 5 | C.16 | 0.005302 |
S | 146 | H146H | caC | caT | 5 | 5 | C.36 | 0.004554 |
S | 146 | H146H | caC | caT | 5 | 5 | P.1.1 | 0.001588 |
S | 146 | H146H | caC | caT | 5 | 5 | P.1.7 | 0.001596 |
S | 146 | H146H | caC | caT | 4 | 4 | AY.12 | 0.001264 |
S | 146 | H146H | caC | caT | 4 | 4 | AY.121 | 0.000541 |
S | 146 | H146H | caC | caT | 4 | 4 | AY.36 | 0.000593 |
S | 146 | H146H | caC | caT | 4 | 4 | AY.69 | 0.000747 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.1.141 | 0.008048 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.1.28 | 0.001245 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.1.294 | 0.005063 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.1.306 | 0.001754 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.1.317 | 0.001647 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.177.60 | 0.000874 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.221 | 0.000284 |
S | 146 | H146H | caC | caT | 4 | 4 | B.1.509 | 0.003463 |
S | 146 | H146H | caC | caT | 4 | 4 | Q.4 | 0.001819 |
S | 146 | H146H | caC | caT | 3 | 3 | A.2.5 | 0.001497 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.116 | 0.00086 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.39.1 | 0.000119 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.41 | 0.000882 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.5.4 | 0.00083 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.61 | 0.000314 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.62 | 0.001307 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.7 | 0.000588 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.70 | 0.000626 |
S | 146 | H146H | caC | caT | 3 | 3 | AY.89 | 0.014706 |
S | 146 | H146H | caC | caT | 3 | 3 | B | 0.000383 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.1.10 | 0.003344 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.1.176 | 0.001318 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.1.284 | 0.000322 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.1.348 | 0.002389 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.1.368 | 0.009259 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.160.16 | 0.002788 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.311 | 0.000824 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.36.17 | 0.001482 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.438.1 | 0.000322 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.470 | 0.004213 |
S | 146 | H146H | caC | caT | 3 | 3 | B.1.637 | 0.000219 |
S | 146 | H146H | caC | caT | 3 | 3 | P.1.12 | 0.001452 |
S | 146 | H146H | caC | caT | 2 | 2 | AD.1 | 0.00823 |
S | 146 | H146H | caC | caT | 2 | 2 | AE.8 | 0.000978 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.106 | 0.00067 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.109 | 0.001479 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.117 | 0.000169 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.13 | 0.000322 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.14 | 0.000176 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.32 | 0.001065 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.53 | 0.000575 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.66 | 0.002139 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.68 | 0.000547 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.7.1 | 0.000225 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.74 | 0.000231 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.85 | 0.000854 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.98 | 0.000158 |
S | 146 | H146H | caC | caT | 2 | 2 | AY.98.1 | 0.000097 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.157 | 0.001826 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.180 | 0.021505 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.192 | 0.004619 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.219 | 0.01 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.229 | 0.011494 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.241 | 0.004141 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.369 | 0.000892 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.37 | 0.000386 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.434 | 0.000697 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.1.453 | 0.016949 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.126 | 0.002551 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.160.25 | 0.022222 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.177.40 | 0.010309 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.177.44 | 0.001038 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.177.86 | 0.000367 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.178 | 0.047619 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.214.2 | 0.001199 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.265 | 0.002541 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.279 | 0.001027 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.351.2 | 0.000605 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.371 | 0.002245 |
S | 146 | H146H | caC | caT | 2 | 2 | B.1.565 | 0.001621 |
S | 146 | H146H | caC | caT | 2 | 2 | B.40 | 0.000729 |
S | 146 | H146H | caC | caT | 2 | 2 | P.1.10 | 0.000539 |
S | 146 | H146H | caC | caT | 2 | 2 | P.1.4 | 0.001953 |
S | 146 | H146H | caC | caT | 2 | 2 | P.3 | 0.00319 |
S | 146 | H146H | caC | caT | 1 | 1 | A.1 | 0.000282 |
S | 146 | H146H | caC | caT | 1 | 1 | AD.2 | 0.000219 |
S | 146 | H146H | caC | caT | 1 | 1 | AE.1 | 0.011364 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.101 | 0.00049 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.104 | 0.001984 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.107 | 0.000466 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.120.1 | 0.000321 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.120.2 | 0.001285 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.19 | 0.00114 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.24 | 0.000431 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.3.1 | 0.000085 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.34 | 0.000097 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.35 | 0.000233 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.37 | 0.000316 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.38 | 0.000499 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.64 | 0.000595 |
S | 146 | H146H | caC | caT | 1 | 1 | AY.84 | 0.000437 |
S | 146 | H146H | caC | caT | 1 | 1 | AZ.1 | 0.000867 |
S | 146 | H146H | caC | caT | 1 | 1 | AZ.3 | 0.00152 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.13 | 0.035714 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.135 | 0.004695 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.203 | 0.016949 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.207 | 0.001182 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.297 | 0.002237 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.302 | 0.002075 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.312 | 0.001912 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.346 | 0.029412 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.349 | 0.010309 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.351 | 0.002793 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.372 | 0.000689 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.39 | 0.00051 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.398 | 0.003226 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.406 | 0.006494 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.413 | 0.006897 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.416 | 0.000905 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.419 | 0.007407 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.420 | 0.001006 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.429 | 0.004608 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.445 | 0.037037 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.47 | 0.005348 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.485 | 0.016667 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.1.63 | 0.000386 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.112 | 0.005181 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.139 | 0.000733 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.160.17 | 0.001701 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.160.28 | 0.002924 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.12 | 0.000152 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.16 | 0.000664 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.26 | 0.006993 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.55 | 0.002331 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.58 | 0.001332 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.62 | 0.001192 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.65 | 0.000665 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.177.81 | 0.000189 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.232 | 0.000537 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.258.11 | 0.000396 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.324 | 0.001605 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.336 | 0.002439 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.338 | 0.008621 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.340 | 0.004292 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.36.18 | 0.00042 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.36.27 | 0.000763 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.36.29 | 0.000517 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.36.39 | 0.002217 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.36.8 | 0.001 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.362 | 0.001541 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.403 | 0.003268 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.428 | 0.00102 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.438.4 | 0.021277 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.456 | 0.003268 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.459 | 0.004082 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.466.1 | 0.007194 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.471 | 0.002732 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.473 | 0.019231 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.497 | 0.000315 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.503 | 0.002488 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.560 | 0.00463 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.564 | 0.000426 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.566 | 0.019231 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.595 | 0.000261 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.612 | 0.002653 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.619 | 0.000871 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.9.5 | 0.005682 |
S | 146 | H146H | caC | caT | 1 | 1 | B.1.93 | 0.000934 |
S | 146 | H146H | caC | caT | 1 | 1 | B.20 | 0.023256 |
S | 146 | H146H | caC | caT | 1 | 1 | B.27 | 0.015385 |
S | 146 | H146H | caC | caT | 1 | 1 | B.3.1 | 0.001658 |
S | 146 | H146H | caC | caT | 1 | 1 | C.23 | 0.005814 |
S | 146 | H146H | caC | caT | 1 | 1 | N.9 | 0.005952 |
S | 146 | H146H | caC | caT | 1 | 1 | P.1.16 | 0.000374 |
S | 146 | H146H | caC | caT | 1 | 1 | P.1.17 | 0.000162 |
S | 146 | H146H | caC | caT | 1 | 1 | P.7 | 0.004367 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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