CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = H1101L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1101H1101LnonsyncAccTc19160.84210524863-24865
S1101H1101LnonsyncACcTA1920.10526324863-24865
S1101H1101LnonsyncACcTT1910.052631624863-24865

Details of the mutation H1101L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1101H1101LcAccTc1619All0.000003
S1101H1101LcACcTA219All0
S1101H1101LcACcTT119All0
S1101H1101LcAccTc360.166667
S1101H1101LcACcTA260.111111
S1101H1101LcACcTT160.055556
S1101H1101LcAccTc66AY.330.000401
S1101H1101LcAccTc33AY.40.000005
S1101H1101LcAccTc11AY.430.000004
S1101H1101LcAccTc11AY.520.000814
S1101H1101LcAccTc11B.10.000009
S1101H1101LcAccTc11B.1.5260.000024