CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = H1101D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1101H1101DnonsynCacGac262026180.99923724863-24865
S1101H1101DnonsynCaCGaT262020.00076335924863-24865

Details of the mutation H1101D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1101H1101DCacGac26182620All0.000501
S1101H1101DCaCGaT22620All0
S1101H1101DCacGac24672469B.1.617.10.318158
S1101H1101DCaCGaT22469B.1.617.10.000258
S1101H1101DCacGac5959B.10.00054
S1101H1101DCacGac1414B.1.1.70.000013
S1101H1101DCacGac1111AY.750.000616
S1101H1101DCacGac1010B.1.617.20.000038
S1101H1101DCacGac88B.1.2140.029304
S1101H1101DCacGac77AY.1030.000043
S1101H1101DCacGac77B.1.10.000127
S1101H1101DCacGac33AY.40.000005
S1101H1101DCacGac22AY.230.000139
S1101H1101DCacGac22AY.400.001929
S1101H1101DCacGac22AY.440.000012
S1101H1101DCacGac22AY.50.000041
S1101H1101DCacGac22AY.680.000547
S1101H1101DCacGac22B0.000256
S1101H1101DCacGac22B.1.177.730.001133
S1101H1101DCacGac11AY.1190.000035
S1101H1101DCacGac11AY.250.000006
S1101H1101DCacGac11AY.4.20.000022
S1101H1101DCacGac11AY.420.00004
S1101H1101DCacGac11AY.430.000004
S1101H1101DCacGac11AY.450.000122
S1101H1101DCacGac11AY.46.60.000072
S1101H1101DCacGac11AY.520.000814
S1101H1101DCacGac11AY.570.000656
S1101H1101DCacGac11AY.610.000105
S1101H1101DCacGac11AY.7.10.000113
S1101H1101DCacGac11AY.75.10.00018
S1101H1101DCacGac11AY.9.20.000037
S1101H1101DCacGac11B.1.1.5190.00004
S1101H1101DCacGac11B.1.177.70.000165
S1101H1101DCacGac11B.1.360.000146
S1101H1101DCacGac11B.1.4990.00105
S1101H1101DCacGac11B.1.5960.000087