CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = G181A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S181G181AnonsyngGagCa11771177122103-22105

Details of the mutation G181A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S181G181AgGagCa11771177All0.000225
S181G181AgGagCa297297B.1.1.70.000266
S181G181AgGagCa9393B.1.6370.006796
S181G181AgGagCa7070B.1.5250.007921
S181G181AgGagCa6464B.1.617.20.000241
S181G181AgGagCa5555AY.40.000086
S181G181AgGagCa4141B.1.4270.00207
S181G181AgGagCa3636AY.430.000159
S181G181AgGagCa3030AY.4.20.000651
S181G181AgGagCa2929AY.1030.00018
S181G181AgGagCa2525AY.440.000152
S181G181AgGagCa2525B.1.10.000454
S181G181AgGagCa2424AY.1020.000636
S181G181AgGagCa2424AY.470.000747
S181G181AgGagCa2424B.1.4990.02521
S181G181AgGagCa2323AY.420.000925
S181G181AgGagCa2020AY.200.000777
S181G181AgGagCa2020B.10.000183
S181G181AgGagCa1313AY.30.000129
S181G181AgGagCa1111AY.4.2.10.001639
S181G181AgGagCa1010B.1.20.000088
S181G181AgGagCa99AY.250.000054
S181G181AgGagCa99B.1.1770.000119
S181G181AgGagCa99B.1.2340.001187
S181G181AgGagCa99P.10.000142
S181G181AgGagCa88AY.270.000518
S181G181AgGagCa88B.1.4290.000188
S181G181AgGagCa77B.1.5770.004811
S181G181AgGagCa66AY.230.000418
S181G181AgGagCa66AY.290.000095
S181G181AgGagCa66B.1.2580.000399
S181G181AgGagCa55B.1.617.10.000645
S181G181AgGagCa55B.1.6210.000443
S181G181AgGagCa44AY.1190.000141
S181G181AgGagCa44AY.390.000099
S181G181AgGagCa44AY.70.000784
S181G181AgGagCa44B.1.1.280.001245
S181G181AgGagCa44B.1.1.3060.001754
S181G181AgGagCa44B.1.1.3750.047619
S181G181AgGagCa44B.1.1.4340.001394
S181G181AgGagCa44B.1.177.120.000607
S181G181AgGagCa44B.1.177.40.000844
S181G181AgGagCa44B.1.2430.000278
S181G181AgGagCa44C.370.000464
S181G181AgGagCa33AY.140.000264
S181G181AgGagCa33AY.330.0002
S181G181AgGagCa33AY.46.60.000217
S181G181AgGagCa33AY.60.000123
S181G181AgGagCa33AY.9.20.00011
S181G181AgGagCa33B.1.1.2200.005576
S181G181AgGagCa33B.1.1.700.001023
S181G181AgGagCa33B.1.3510.000089
S181G181AgGagCa33B.1.351.50.001799
S181G181AgGagCa33B.1.621.10.001517
S181G181AgGagCa33P.1.40.00293
S181G181AgGagCa22A.2.50.000998
S181G181AgGagCa22A.23.10.001408
S181G181AgGagCa22AY.340.000194
S181G181AgGagCa22AY.610.00021
S181G181AgGagCa22AY.740.000231
S181G181AgGagCa22AY.980.000158
S181G181AgGagCa22B.1.1.3180.000604
S181G181AgGagCa22B.1.1.3480.001592
S181G181AgGagCa22B.1.1.4320.002532
S181G181AgGagCa22B.1.36.290.001035
S181G181AgGagCa22B.1.438.10.000215
S181G181AgGagCa22B.1.5880.00182
S181G181AgGagCa22B.1.6090.000959
S181G181AgGagCa22C.360.001821
S181G181AgGagCa22D.20.00015
S181G181AgGagCa11AE.80.000489
S181G181AgGagCa11AY.1140.000231
S181G181AgGagCa11AY.1180.000063
S181G181AgGagCa11AY.120.000316
S181G181AgGagCa11AY.1200.000037
S181G181AgGagCa11AY.1210.000135
S181G181AgGagCa11AY.360.000148
S181G181AgGagCa11AY.39.10.00004
S181G181AgGagCa11AY.46.10.001027
S181G181AgGagCa11AY.5.30.000337
S181G181AgGagCa11AY.5.40.000277
S181G181AgGagCa11AY.530.000288
S181G181AgGagCa11AY.660.00107
S181G181AgGagCa11AY.750.000056
S181G181AgGagCa11AY.770.001127
S181G181AgGagCa11AY.800.001129
S181G181AgGagCa11AY.920.000287
S181G181AgGagCa11AY.99.20.000092
S181G181AgGagCa11B.1.1.1350.004695
S181G181AgGagCa11B.1.1.1520.04
S181G181AgGagCa11B.1.1.1760.000439
S181G181AgGagCa11B.1.1.2140.000055
S181G181AgGagCa11B.1.1.2160.00089
S181G181AgGagCa11B.1.1.2190.005
S181G181AgGagCa11B.1.1.2220.000204
S181G181AgGagCa11B.1.1.2240.014286
S181G181AgGagCa11B.1.1.2790.001121
S181G181AgGagCa11B.1.1.3170.000412
S181G181AgGagCa11B.1.1.4130.006897
S181G181AgGagCa11B.1.1.5190.00004
S181G181AgGagCa11B.1.1.630.000386
S181G181AgGagCa11B.1.1600.000031
S181G181AgGagCa11B.1.177.870.000728
S181G181AgGagCa11B.1.1920.009259
S181G181AgGagCa11B.1.2140.003663
S181G181AgGagCa11B.1.2210.000071
S181G181AgGagCa11B.1.258.120.007874
S181G181AgGagCa11B.1.2650.001271
S181G181AgGagCa11B.1.360.000146
S181G181AgGagCa11B.1.36.160.001425
S181G181AgGagCa11B.1.3990.001934
S181G181AgGagCa11B.1.4000.000429
S181G181AgGagCa11B.1.4280.00102
S181G181AgGagCa11B.1.4620.007246
S181G181AgGagCa11B.60.00091
S181G181AgGagCa11C.350.000774
S181G181AgGagCa11C.36.30.000567
S181G181AgGagCa11Q.10.000126
S181G181AgGagCa11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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