CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 142 | G142del | del | GGT | --- | 6014 | 6014 | 1 | 21986-21988 |
Details of the mutation G142del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 142 | G142del | GGT | --- | 6014 | 6014 | All | 0.00115 |
S | 142 | G142del | GGT | --- | 1616 | 1616 | A.2.5 | 0.806387 |
S | 142 | G142del | GGT | --- | 588 | 588 | P.3 | 0.937799 |
S | 142 | G142del | GGT | --- | 531 | 531 | A.2.5.2 | 0.834906 |
S | 142 | G142del | GGT | --- | 338 | 338 | B.1.429 | 0.007953 |
S | 142 | G142del | GGT | --- | 274 | 274 | P.1 | 0.004317 |
S | 142 | G142del | GGT | --- | 232 | 232 | B.1.1.7 | 0.000208 |
S | 142 | G142del | GGT | --- | 172 | 172 | A.2.5.1 | 0.826923 |
S | 142 | G142del | GGT | --- | 160 | 160 | AT.1 | 0.820513 |
S | 142 | G142del | GGT | --- | 102 | 102 | C.38 | 0.822581 |
S | 142 | G142del | GGT | --- | 100 | 100 | B.1.351 | 0.002973 |
S | 142 | G142del | GGT | --- | 97 | 97 | B.1 | 0.000888 |
S | 142 | G142del | GGT | --- | 93 | 93 | AY.4 | 0.000145 |
S | 142 | G142del | GGT | --- | 93 | 93 | B.1.2 | 0.000819 |
S | 142 | G142del | GGT | --- | 92 | 92 | A.2.5.3 | 0.948454 |
S | 142 | G142del | GGT | --- | 89 | 89 | B.1.526 | 0.002092 |
S | 142 | G142del | GGT | --- | 74 | 74 | B.1.177 | 0.000974 |
S | 142 | G142del | GGT | --- | 62 | 62 | B.1.1 | 0.001125 |
S | 142 | G142del | GGT | --- | 48 | 48 | B.1.635 | 0.842105 |
S | 142 | G142del | GGT | --- | 44 | 44 | B.1.1.524 | 0.916667 |
S | 142 | G142del | GGT | --- | 43 | 43 | B.1.160 | 0.001341 |
S | 142 | G142del | GGT | --- | 42 | 42 | AY.43 | 0.000186 |
S | 142 | G142del | GGT | --- | 31 | 31 | N.10 | 0.911765 |
S | 142 | G142del | GGT | --- | 29 | 29 | P.1.3 | 1 |
S | 142 | G142del | GGT | --- | 27 | 27 | B.1.258.17 | 0.002807 |
S | 142 | G142del | GGT | --- | 26 | 26 | AY.103 | 0.000161 |
S | 142 | G142del | GGT | --- | 24 | 24 | P.1.15 | 0.005576 |
S | 142 | G142del | GGT | --- | 21 | 21 | AY.25 | 0.000126 |
S | 142 | G142del | GGT | --- | 21 | 21 | B.1.576 | 0.019039 |
S | 142 | G142del | GGT | --- | 20 | 20 | B.1.1.519 | 0.000794 |
S | 142 | G142del | GGT | --- | 20 | 20 | B.1.258 | 0.001331 |
S | 142 | G142del | GGT | --- | 19 | 19 | B.1.221 | 0.00135 |
S | 142 | G142del | GGT | --- | 16 | 16 | AY.4.2 | 0.000347 |
S | 142 | G142del | GGT | --- | 16 | 16 | B.1.177.21 | 0.001224 |
S | 142 | G142del | GGT | --- | 16 | 16 | B.1.243 | 0.001113 |
S | 142 | G142del | GGT | --- | 16 | 16 | B.1.438.1 | 0.001716 |
S | 142 | G142del | GGT | --- | 15 | 15 | B.1.234 | 0.001979 |
S | 142 | G142del | GGT | --- | 15 | 15 | B.1.621 | 0.001328 |
S | 142 | G142del | GGT | --- | 14 | 14 | AY.3 | 0.000139 |
S | 142 | G142del | GGT | --- | 14 | 14 | AY.44 | 0.000085 |
S | 142 | G142del | GGT | --- | 14 | 14 | P.1.14 | 0.000669 |
S | 142 | G142del | GGT | --- | 13 | 13 | B.1.369 | 0.003708 |
S | 142 | G142del | GGT | --- | 12 | 12 | AY.102 | 0.000318 |
S | 142 | G142del | GGT | --- | 12 | 12 | B.1.1.297 | 0.026846 |
S | 142 | G142del | GGT | --- | 12 | 12 | B.1.617.2 | 0.000045 |
S | 142 | G142del | GGT | --- | 12 | 12 | P.1.6 | 0.023346 |
S | 142 | G142del | GGT | --- | 11 | 11 | B.1.177.42 | 0.009839 |
S | 142 | G142del | GGT | --- | 11 | 11 | B.1.258.14 | 0.010784 |
S | 142 | G142del | GGT | --- | 10 | 10 | B.1.1.298 | 0.008621 |
S | 142 | G142del | GGT | --- | 10 | 10 | B.1.427 | 0.000505 |
S | 142 | G142del | GGT | --- | 9 | 9 | AY.100 | 0.000414 |
S | 142 | G142del | GGT | --- | 9 | 9 | B.1.638 | 0.473684 |
S | 142 | G142del | GGT | --- | 9 | 9 | Q.3 | 0.001305 |
S | 142 | G142del | GGT | --- | 8 | 8 | AY.26 | 0.000226 |
S | 142 | G142del | GGT | --- | 8 | 8 | B.1.1.368 | 0.024691 |
S | 142 | G142del | GGT | --- | 8 | 8 | P.1.17 | 0.001294 |
S | 142 | G142del | GGT | --- | 7 | 7 | AY.42 | 0.000282 |
S | 142 | G142del | GGT | --- | 7 | 7 | B | 0.000895 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.1.28 | 0.002179 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.1.318 | 0.002112 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.36 | 0.001021 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.486 | 0.777778 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.574 | 0.015054 |
S | 142 | G142del | GGT | --- | 7 | 7 | B.1.617.1 | 0.000903 |
S | 142 | G142del | GGT | --- | 6 | 6 | AY.29 | 0.000095 |
S | 142 | G142del | GGT | --- | 6 | 6 | AY.39 | 0.000148 |
S | 142 | G142del | GGT | --- | 6 | 6 | AY.4.2.1 | 0.000894 |
S | 142 | G142del | GGT | --- | 6 | 6 | AY.47 | 0.000187 |
S | 142 | G142del | GGT | --- | 6 | 6 | AY.9 | 0.000406 |
S | 142 | G142del | GGT | --- | 6 | 6 | B.1.1.214 | 0.000333 |
S | 142 | G142del | GGT | --- | 6 | 6 | B.1.1.37 | 0.001157 |
S | 142 | G142del | GGT | --- | 6 | 6 | B.1.1.434 | 0.002091 |
S | 142 | G142del | GGT | --- | 6 | 6 | B.1.128 | 0.003812 |
S | 142 | G142del | GGT | --- | 6 | 6 | B.1.637 | 0.000438 |
S | 142 | G142del | GGT | --- | 5 | 5 | A.1 | 0.001409 |
S | 142 | G142del | GGT | --- | 5 | 5 | B.1.1.284 | 0.000537 |
S | 142 | G142del | GGT | --- | 5 | 5 | B.1.177.6 | 0.004883 |
S | 142 | G142del | GGT | --- | 5 | 5 | B.1.389 | 0.00501 |
S | 142 | G142del | GGT | --- | 5 | 5 | B.1.596 | 0.000436 |
S | 142 | G142del | GGT | --- | 5 | 5 | B.1.628 | 0.001762 |
S | 142 | G142del | GGT | --- | 5 | 5 | D.2 | 0.000375 |
S | 142 | G142del | GGT | --- | 5 | 5 | P.1.10 | 0.001347 |
S | 142 | G142del | GGT | --- | 5 | 5 | P.1.12 | 0.00242 |
S | 142 | G142del | GGT | --- | 4 | 4 | AY.35 | 0.000932 |
S | 142 | G142del | GGT | --- | 4 | 4 | AY.75.1 | 0.000721 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.159 | 0.018692 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.218 | 0.030769 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.232 | 0.00726 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.294 | 0.005063 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.306 | 0.001754 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.369 | 0.001785 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.50 | 0.002716 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.1.57 | 0.045977 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.177.4 | 0.000844 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.177.86 | 0.000734 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.232 | 0.002149 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.319 | 0.012195 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.561 | 0.001588 |
S | 142 | G142del | GGT | --- | 4 | 4 | B.1.621.1 | 0.002023 |
S | 142 | G142del | GGT | --- | 4 | 4 | P.1.1 | 0.001271 |
S | 142 | G142del | GGT | --- | 4 | 4 | P.2 | 0.000747 |
S | 142 | G142del | GGT | --- | 3 | 3 | A | 0.001161 |
S | 142 | G142del | GGT | --- | 3 | 3 | A.2 | 0.001985 |
S | 142 | G142del | GGT | --- | 3 | 3 | A.3 | 0.006289 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.101 | 0.001471 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.119 | 0.000106 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.120 | 0.000112 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.46 | 0.000312 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.5 | 0.000062 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.74 | 0.000347 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.9.2 | 0.00011 |
S | 142 | G142del | GGT | --- | 3 | 3 | AY.92 | 0.000862 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.25 | 0.001706 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.253 | 0.007519 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.286 | 0.008696 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.311 | 0.001074 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.33 | 0.001263 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.39 | 0.001529 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.1.63 | 0.001157 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.177.12 | 0.000455 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.177.16 | 0.001993 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.177.30 | 0.007538 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.177.81 | 0.000568 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.240 | 0.000647 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.241 | 0.002435 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.320 | 0.003736 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.351.2 | 0.000908 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.36.8 | 0.003 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.367 | 0.002377 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.565 | 0.002431 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.575 | 0.00091 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.1.595 | 0.000783 |
S | 142 | G142del | GGT | --- | 3 | 3 | B.40 | 0.001093 |
S | 142 | G142del | GGT | --- | 3 | 3 | P.1.2 | 0.003468 |
S | 142 | G142del | GGT | --- | 2 | 2 | A.29 | 0.010638 |
S | 142 | G142del | GGT | --- | 2 | 2 | AB.1 | 0.016393 |
S | 142 | G142del | GGT | --- | 2 | 2 | AC.1 | 0.074074 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.1 | 0.000791 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.108 | 0.002205 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.14 | 0.000176 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.34.1 | 0.00102 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.36 | 0.000296 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.4.5 | 0.000215 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.65 | 0.001066 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.84 | 0.000875 |
S | 142 | G142del | GGT | --- | 2 | 2 | AY.99 | 0.002099 |
S | 142 | G142del | GGT | --- | 2 | 2 | AZ.5 | 0.007018 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.10 | 0.00223 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.170 | 0.002494 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.220 | 0.003717 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.241 | 0.004141 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.263 | 0.003115 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.316 | 0.00185 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.464 | 0.002946 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.528 | 0.009615 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.1.70 | 0.000682 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.110.3 | 0.001437 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.160.28 | 0.005848 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.177.44 | 0.001038 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.177.5 | 0.002484 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.177.57 | 0.000562 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.221.2 | 0.008032 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.221.4 | 0.008333 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.222 | 0.003384 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.239 | 0.002442 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.258.11 | 0.000793 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.311 | 0.000549 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.351.3 | 0.001753 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.36.38 | 0.003284 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.380 | 0.013245 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.393 | 0.057143 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.396 | 0.001411 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.404 | 0.002604 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.465 | 0.007605 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.509 | 0.001732 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.525 | 0.000226 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.555 | 0.044444 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.620 | 0.001892 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.623 | 0.001073 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.1.93 | 0.001867 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.3 | 0.001661 |
S | 142 | G142del | GGT | --- | 2 | 2 | B.52 | 0.020202 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.1.2 | 0.008511 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.16 | 0.002121 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.18 | 0.005181 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.30 | 0.003454 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.36.3 | 0.001134 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.36.3.1 | 0.005435 |
S | 142 | G142del | GGT | --- | 2 | 2 | C.37 | 0.000232 |
S | 142 | G142del | GGT | --- | 2 | 2 | L.3 | 0.007092 |
S | 142 | G142del | GGT | --- | 2 | 2 | P.1.13 | 0.001797 |
S | 142 | G142del | GGT | --- | 2 | 2 | P.1.16 | 0.000748 |
S | 142 | G142del | GGT | --- | 2 | 2 | R.1 | 0.00018 |
S | 142 | G142del | GGT | --- | 1 | 1 | A.23.1 | 0.000704 |
S | 142 | G142del | GGT | --- | 1 | 1 | AD.2 | 0.000219 |
S | 142 | G142del | GGT | --- | 1 | 1 | AE.8 | 0.000489 |
S | 142 | G142del | GGT | --- | 1 | 1 | AK.1 | 0.012658 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.10 | 0.00053 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.106 | 0.000335 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.107 | 0.000466 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.109 | 0.00074 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.113 | 0.000142 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.118 | 0.000063 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.120.2 | 0.001285 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.121 | 0.000135 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.23 | 0.00007 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.27 | 0.000065 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.29.1 | 0.000221 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.33 | 0.000067 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.4.1 | 0.000737 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.45 | 0.000122 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.60 | 0.000938 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.62 | 0.000436 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.7.2 | 0.000559 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.73 | 0.000665 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.75 | 0.000056 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.78 | 0.001541 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.85 | 0.000427 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.9.1 | 0.000084 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.97 | 0.001701 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.98 | 0.000079 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.98.1 | 0.000048 |
S | 142 | G142del | GGT | --- | 1 | 1 | AY.99.1 | 0.001553 |
S | 142 | G142del | GGT | --- | 1 | 1 | AZ.2 | 0.000821 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.118 | 0.010204 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.137 | 0.0125 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.139 | 0.022727 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.153 | 0.001095 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.189 | 0.001513 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.203 | 0.016949 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.216 | 0.00089 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.219 | 0.005 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.229 | 0.005747 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.240 | 0.004695 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.258 | 0.003257 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.265 | 0.003155 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.266 | 0.012195 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.267 | 0.010101 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.269 | 0.001353 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.279 | 0.001121 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.344 | 0.010753 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.348 | 0.000796 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.372 | 0.000689 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.397 | 0.002252 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.401 | 0.066667 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.402 | 0.011111 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.409 | 0.002833 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.41 | 0.006329 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.420 | 0.001006 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.447 | 0.035714 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.53 | 0.013699 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.71 | 0.006061 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.1.89 | 0.006061 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.111 | 0.001175 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.113 | 0.015625 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.126 | 0.001276 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.13 | 0.002375 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.131 | 0.008772 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.157 | 0.002985 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.160.23 | 0.004831 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.160.26 | 0.002421 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.160.27 | 0.015152 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.160.7 | 0.002079 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.160.8 | 0.001289 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.167 | 0.007812 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.11 | 0.001698 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.33 | 0.001645 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.45 | 0.000381 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.50 | 0.004695 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.54 | 0.000606 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.58 | 0.001332 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.7 | 0.000165 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.73 | 0.000566 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.75 | 0.001041 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.76 | 0.002494 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.8 | 0.000752 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.83 | 0.001481 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.85 | 0.005435 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.177.87 | 0.000728 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.199 | 0.004132 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.223 | 0.002778 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.237 | 0.004975 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.264 | 0.012346 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.270 | 0.005618 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.279 | 0.000514 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.291 | 0.019231 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.3 | 0.002618 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.314 | 0.007519 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.332 | 0.003497 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.36.22 | 0.001208 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.36.31 | 0.001751 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.36.37 | 0.002778 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.37 | 0.014706 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.391 | 0.001127 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.395 | 0.007042 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.399 | 0.001934 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.400 | 0.000429 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.415 | 0.014286 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.416 | 0.001269 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.433 | 0.003195 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.462 | 0.007246 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.466.1 | 0.007194 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.468 | 0.005714 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.473 | 0.019231 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.478 | 0.011765 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.480 | 0.002488 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.499 | 0.00105 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.517.1 | 0.005263 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.527 | 0.003704 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.532 | 0.006211 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.539 | 0.017544 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.551 | 0.00129 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.567 | 0.003333 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.577 | 0.000687 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.582 | 0.000491 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.585 | 0.027778 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.587 | 0.001898 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.588 | 0.00091 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.596.1 | 0.009346 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.612 | 0.002653 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.625 | 0.002353 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.627 | 0.00202 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.1.91 | 0.002075 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.23 | 0.002924 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.31 | 0.003731 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.39 | 0.002331 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.55 | 0.00295 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.6 | 0.00091 |
S | 142 | G142del | GGT | --- | 1 | 1 | B.6.6 | 0.000889 |
S | 142 | G142del | GGT | --- | 1 | 1 | C.23 | 0.005814 |
S | 142 | G142del | GGT | --- | 1 | 1 | D.5 | 0.004975 |
S | 142 | G142del | GGT | --- | 1 | 1 | P.1.11 | 0.010204 |
S | 142 | G142del | GGT | --- | 1 | 1 | P.1.4 | 0.000977 |
S | 142 | G142del | GGT | --- | 1 | 1 | P.5 | 0.013699 |
S | 142 | G142del | GGT | --- | 1 | 1 | Q.1 | 0.000126 |
S | 142 | G142del | GGT | --- | 1 | 1 | Q.2 | 0.000613 |
S | 142 | G142del | GGT | --- | 1 | 1 | Q.4 | 0.000455 |
S | 142 | G142del | GGT | --- | 1 | 1 | Q.7 | 0.001111 |
S | 142 | G142del | GGT | --- | 1 | 1 | V.1 | 0.022727 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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