CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = G1124V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1124G1124VnonsyngGtgTt1212112121124932-24934

Details of the mutation G1124V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1124G1124VgGtgTt1212112121All0.002318
S1124G1124VgGtgTt45624562AY.40.0071
S1124G1124VgGtgTt11241124AY.9.20.041284
S1124G1124VgGtgTt10521052AY.430.004661
S1124G1124VgGtgTt554554B.1.617.20.002086
S1124G1124VgGtgTt369369AY.30.00367
S1124G1124VgGtgTt336336D.20.025214
S1124G1124VgGtgTt260260AY.250.001564
S1124G1124VgGtgTt260260AY.440.001583
S1124G1124VgGtgTt210210B.10.001923
S1124G1124VgGtgTt189189AY.1030.001174
S1124G1124VgGtgTt154154AY.200.005985
S1124G1124VgGtgTt121121AY.4.20.002624
S1124G1124VgGtgTt114114AY.420.004586
S1124G1124VgGtgTt111111B.1.1770.001462
S1124G1124VgGtgTt101101AY.390.002496
S1124G1124VgGtgTt9898B.1.20.000863
S1124G1124VgGtgTt8282AY.130.0132
S1124G1124VgGtgTt7676AY.50.001569
S1124G1124VgGtgTt6666AY.1020.00175
S1124G1124VgGtgTt5757B.1.1.70.000051
S1124G1124VgGtgTt5555AY.46.40.009048
S1124G1124VgGtgTt5353B.1.10.000961
S1124G1124VgGtgTt5252AW.10.158537
S1124G1124VgGtgTt5252AY.1200.001933
S1124G1124VgGtgTt4545B.1.4290.001059
S1124G1124VgGtgTt4444P.10.000693
S1124G1124VgGtgTt4343AY.260.001217
S1124G1124VgGtgTt4242B.1.5260.000987
S1124G1124VgGtgTt3838AY.470.001182
S1124G1124VgGtgTt3737B.1.3510.0011
S1124G1124VgGtgTt3636AY.290.000568
S1124G1124VgGtgTt3535AY.980.002765
S1124G1124VgGtgTt3535B.1.6280.012333
S1124G1124VgGtgTt3434AY.1000.001564
S1124G1124VgGtgTt3333AY.340.0032
S1124G1124VgGtgTt3131AY.1190.001095
S1124G1124VgGtgTt3131AY.330.00207
S1124G1124VgGtgTt3131AY.39.10.001228
S1124G1124VgGtgTt3131AY.60.001275
S1124G1124VgGtgTt2929AY.540.002765
S1124G1124VgGtgTt2828B.1.5250.003168
S1124G1124VgGtgTt2727AY.90.001825
S1124G1124VgGtgTt2626B.1.2430.001809
S1124G1124VgGtgTt2525AY.9.10.002093
S1124G1124VgGtgTt2525B.1.5960.002178
S1124G1124VgGtgTt2424AY.3.10.002046
S1124G1124VgGtgTt2424AY.98.10.001162
S1124G1124VgGtgTt2323AY.46.60.001661
S1124G1124VgGtgTt2020B.1.177.810.003786
S1124G1124VgGtgTt1919AY.1080.020948
S1124G1124VgGtgTt1919AY.1170.001606
S1124G1124VgGtgTt1919AY.450.002312
S1124G1124VgGtgTt1919AY.500.015188
S1124G1124VgGtgTt1919B.1.2340.002507
S1124G1124VgGtgTt1919B.1.6310.063973
S1124G1124VgGtgTt1818AY.460.001873
S1124G1124VgGtgTt1717A.2.5.10.081731
S1124G1124VgGtgTt1717B.1.2210.001208
S1124G1124VgGtgTt1616AY.99.20.001475
S1124G1124VgGtgTt1616B.1.1.3110.005731
S1124G1124VgGtgTt1414AY.230.000976
S1124G1124VgGtgTt1414AY.4.2.10.002086
S1124G1124VgGtgTt1414AY.610.001467
S1124G1124VgGtgTt1414AY.900.009582
S1124G1124VgGtgTt1414B.1.1600.000437
S1124G1124VgGtgTt1414B.1.177.210.001071
S1124G1124VgGtgTt1414B.1.4270.000707
S1124G1124VgGtgTt1414B.1.4340.736842
S1124G1124VgGtgTt1414B.1.6370.001023
S1124G1124VgGtgTt1313AY.1050.00836
S1124G1124VgGtgTt1313AY.1210.001759
S1124G1124VgGtgTt1313AY.140.001144
S1124G1124VgGtgTt1313AY.270.000841
S1124G1124VgGtgTt1313B.1.6190.011324
S1124G1124VgGtgTt1212AY.1180.000752
S1124G1124VgGtgTt1111AY.750.000616
S1124G1124VgGtgTt1111B.1.1.5190.000437
S1124G1124VgGtgTt1111B.1.2580.000732
S1124G1124VgGtgTt1010AY.1130.001424
S1124G1124VgGtgTt1010AY.4.10.007375
S1124G1124VgGtgTt1010AY.4.50.001075
S1124G1124VgGtgTt1010B.1.1.2790.011211
S1124G1124VgGtgTt1010B.1.177.70.001649
S1124G1124VgGtgTt1010B.1.2400.002156
S1124G1124VgGtgTt1010C.360.009107
S1124G1124VgGtgTt99A.2.50.004491
S1124G1124VgGtgTt99AY.16.10.004229
S1124G1124VgGtgTt99AY.70.001764
S1124G1124VgGtgTt99B.1.351.50.005396
S1124G1124VgGtgTt88AY.29.10.001764
S1124G1124VgGtgTt88AY.620.003486
S1124G1124VgGtgTt88B.1.177.860.001468
S1124G1124VgGtgTt88B.1.4970.002518
S1124G1124VgGtgTt88B.4.50.095238
S1124G1124VgGtgTt77A.10.001973
S1124G1124VgGtgTt77AY.1060.002344
S1124G1124VgGtgTt77AY.1140.001618
S1124G1124VgGtgTt77AY.680.001916
S1124G1124VgGtgTt77AY.75.10.001262
S1124G1124VgGtgTt77B.1.177.260.048951
S1124G1124VgGtgTt77B.1.177.40.001477
S1124G1124VgGtgTt77B.1.360.001021
S1124G1124VgGtgTt66A.2.5.20.009434
S1124G1124VgGtgTt66AY.1110.001099
S1124G1124VgGtgTt66AY.360.000889
S1124G1124VgGtgTt66AY.370.001896
S1124G1124VgGtgTt66AY.380.002996
S1124G1124VgGtgTt66AY.5.30.002024
S1124G1124VgGtgTt66AY.530.001725
S1124G1124VgGtgTt66AY.650.003198
S1124G1124VgGtgTt66AY.7.10.000676
S1124G1124VgGtgTt66AY.700.001251
S1124G1124VgGtgTt66AY.740.000694
S1124G1124VgGtgTt66B.1.258.170.000624
S1124G1124VgGtgTt55AY.1100.000563
S1124G1124VgGtgTt55AY.300.001979
S1124G1124VgGtgTt55AY.350.001165
S1124G1124VgGtgTt55AY.4.30.004209
S1124G1124VgGtgTt55AY.480.002326
S1124G1124VgGtgTt55AY.580.004537
S1124G1124VgGtgTt55AY.630.001934
S1124G1124VgGtgTt55AY.780.007704
S1124G1124VgGtgTt55AY.800.005643
S1124G1124VgGtgTt55AY.840.002187
S1124G1124VgGtgTt55B0.000639
S1124G1124VgGtgTt55B.1.1.390.002548
S1124G1124VgGtgTt55B.1.177.870.003639
S1124G1124VgGtgTt55B.1.3110.001373
S1124G1124VgGtgTt55B.1.351.20.001513
S1124G1124VgGtgTt55B.1.4000.002145
S1124G1124VgGtgTt55B.1.5950.001305
S1124G1124VgGtgTt55B.310.018657
S1124G1124VgGtgTt55C.180.012953
S1124G1124VgGtgTt44A.23.10.002817
S1124G1124VgGtgTt44AA.10.028986
S1124G1124VgGtgTt44AY.1010.001962
S1124G1124VgGtgTt44AY.1090.002959
S1124G1124VgGtgTt44AY.320.00213
S1124G1124VgGtgTt44AY.4.40.001637
S1124G1124VgGtgTt44AY.410.001176
S1124G1124VgGtgTt44AY.46.50.000794
S1124G1124VgGtgTt44AY.5.40.001107
S1124G1124VgGtgTt44AY.710.0019
S1124G1124VgGtgTt44AY.730.002661
S1124G1124VgGtgTt44AY.850.001709
S1124G1124VgGtgTt44B.1.1.2220.000816
S1124G1124VgGtgTt44B.1.177.60.003906
S1124G1124VgGtgTt44B.1.36.290.002069
S1124G1124VgGtgTt44B.1.4110.014815
S1124G1124VgGtgTt44B.1.5170.001708
S1124G1124VgGtgTt44B.60.00364
S1124G1124VgGtgTt44C.370.000464
S1124G1124VgGtgTt44P.1.170.000647
S1124G1124VgGtgTt33A0.001161
S1124G1124VgGtgTt33A.20.001985
S1124G1124VgGtgTt33AY.10.001187
S1124G1124VgGtgTt33AY.1160.00086
S1124G1124VgGtgTt33AY.116.10.000934
S1124G1124VgGtgTt33AY.560.004815
S1124G1124VgGtgTt33AY.910.002191
S1124G1124VgGtgTt33AY.990.003148
S1124G1124VgGtgTt33B.1.1.330.001263
S1124G1124VgGtgTt33B.1.1.3520.09375
S1124G1124VgGtgTt33B.1.1240.023438
S1124G1124VgGtgTt33B.1.160.70.006237
S1124G1124VgGtgTt33B.1.177.580.003995
S1124G1124VgGtgTt33B.1.177.730.001699
S1124G1124VgGtgTt33B.1.2060.002447
S1124G1124VgGtgTt33B.1.2100.006397
S1124G1124VgGtgTt33B.1.220.003953
S1124G1124VgGtgTt33B.1.2410.002435
S1124G1124VgGtgTt33B.1.3200.003736
S1124G1124VgGtgTt33B.1.3690.000856
S1124G1124VgGtgTt33B.1.3910.003382
S1124G1124VgGtgTt33B.1.4560.009804
S1124G1124VgGtgTt33B.1.5870.005693
S1124G1124VgGtgTt33B.1.6090.001438
S1124G1124VgGtgTt33B.1.617.10.000387
S1124G1124VgGtgTt33B.1.6210.000266
S1124G1124VgGtgTt33B.1.6250.007059
S1124G1124VgGtgTt33C.36.30.001702
S1124G1124VgGtgTt33P.1.140.000143
S1124G1124VgGtgTt220.111111
S1124G1124VgGtgTt22A.280.005291
S1124G1124VgGtgTt22AD.2.10.090909
S1124G1124VgGtgTt22AE.80.000978
S1124G1124VgGtgTt22AL.10.025974
S1124G1124VgGtgTt22AY.1040.003968
S1124G1124VgGtgTt22AY.120.2.10.000997
S1124G1124VgGtgTt22AY.160.000759
S1124G1124VgGtgTt22AY.240.000862
S1124G1124VgGtgTt22AY.39.1.10.001449
S1124G1124VgGtgTt22AY.690.000373
S1124G1124VgGtgTt22AY.790.002421
S1124G1124VgGtgTt22AY.920.000575
S1124G1124VgGtgTt22AY.940.000885
S1124G1124VgGtgTt22AY.960.004149
S1124G1124VgGtgTt22B.1.1.1110.029412
S1124G1124VgGtgTt22B.1.1.2140.000111
S1124G1124VgGtgTt22B.1.1.2160.001781
S1124G1124VgGtgTt22B.1.1.2190.01
S1124G1124VgGtgTt22B.1.1.3060.000877
S1124G1124VgGtgTt22B.1.1.3740.004751
S1124G1124VgGtgTt22B.1.1.3810.08
S1124G1124VgGtgTt22B.1.1.4340.000697
S1124G1124VgGtgTt22B.1.1.5210.010695
S1124G1124VgGtgTt22B.1.1.700.000682
S1124G1124VgGtgTt22B.1.1050.019231
S1124G1124VgGtgTt22B.1.160.140.004237
S1124G1124VgGtgTt22B.1.160.160.001859
S1124G1124VgGtgTt22B.1.160.180.014599
S1124G1124VgGtgTt22B.1.177.250.029851
S1124G1124VgGtgTt22B.1.177.420.001789
S1124G1124VgGtgTt22B.1.177.440.001038
S1124G1124VgGtgTt22B.1.177.450.000762
S1124G1124VgGtgTt22B.1.177.540.001213
S1124G1124VgGtgTt22B.1.177.600.000437
S1124G1124VgGtgTt22B.1.177.620.002384
S1124G1124VgGtgTt22B.1.177.650.001331
S1124G1124VgGtgTt22B.1.177.830.002963
S1124G1124VgGtgTt22B.1.2180.010309
S1124G1124VgGtgTt22B.1.230.012121
S1124G1124VgGtgTt22B.1.2320.001075
S1124G1124VgGtgTt22B.1.2790.001027
S1124G1124VgGtgTt22B.1.3290.001215
S1124G1124VgGtgTt22B.1.3670.001585
S1124G1124VgGtgTt22B.1.4250.005988
S1124G1124VgGtgTt22B.1.4260.002018
S1124G1124VgGtgTt22B.1.438.10.000215
S1124G1124VgGtgTt22B.1.4590.008163
S1124G1124VgGtgTt22B.1.5750.000607
S1124G1124VgGtgTt22B.1.5970.009259
S1124G1124VgGtgTt22B.1.621.10.001012
S1124G1124VgGtgTt22B.1.6270.00404
S1124G1124VgGtgTt22B.280.006557
S1124G1124VgGtgTt22B.290.007018
S1124G1124VgGtgTt22B.30.001661
S1124G1124VgGtgTt22N.40.008511
S1124G1124VgGtgTt22P.1.20.002312
S1124G1124VgGtgTt22R.10.00018
S1124G1124VgGtgTt11A.2.20.001689
S1124G1124VgGtgTt11AA.20.007692
S1124G1124VgGtgTt11AS.10.009524
S1124G1124VgGtgTt11AS.20.015625
S1124G1124VgGtgTt11AT.10.005128
S1124G1124VgGtgTt11AY.100.00053
S1124G1124VgGtgTt11AY.1070.000466
S1124G1124VgGtgTt11AY.110.001339
S1124G1124VgGtgTt11AY.120.000316
S1124G1124VgGtgTt11AY.20.000356
S1124G1124VgGtgTt11AY.34.10.00051
S1124G1124VgGtgTt11AY.400.000964
S1124G1124VgGtgTt11AY.510.000909
S1124G1124VgGtgTt11AY.590.00053
S1124G1124VgGtgTt11AY.600.000938
S1124G1124VgGtgTt11AY.7.20.000559
S1124G1124VgGtgTt11AY.80.000606
S1124G1124VgGtgTt11AY.820.001357
S1124G1124VgGtgTt11AY.930.000273
S1124G1124VgGtgTt11AY.950.000761
S1124G1124VgGtgTt11AY.970.001701
S1124G1124VgGtgTt11B.1.1.10.000327
S1124G1124VgGtgTt11B.1.1.100.001115
S1124G1124VgGtgTt11B.1.1.1170.009709
S1124G1124VgGtgTt11B.1.1.1210.002427
S1124G1124VgGtgTt11B.1.1.1570.000913
S1124G1124VgGtgTt11B.1.1.1700.001247
S1124G1124VgGtgTt11B.1.1.1740.003378
S1124G1124VgGtgTt11B.1.1.1760.000439
S1124G1124VgGtgTt11B.1.1.1770.019231
S1124G1124VgGtgTt11B.1.1.1890.001513
S1124G1124VgGtgTt11B.1.1.2280.003049
S1124G1124VgGtgTt11B.1.1.2630.001558
S1124G1124VgGtgTt11B.1.1.2820.011628
S1124G1124VgGtgTt11B.1.1.2890.002083
S1124G1124VgGtgTt11B.1.1.2910.000742
S1124G1124VgGtgTt11B.1.1.2940.001266
S1124G1124VgGtgTt11B.1.1.2980.000862
S1124G1124VgGtgTt11B.1.1.3170.000412
S1124G1124VgGtgTt11B.1.1.3250.025641
S1124G1124VgGtgTt11B.1.1.3480.000796
S1124G1124VgGtgTt11B.1.1.3540.004386
S1124G1124VgGtgTt11B.1.1.3690.000446
S1124G1124VgGtgTt11B.1.1.370.000193
S1124G1124VgGtgTt11B.1.1.4160.000905
S1124G1124VgGtgTt11B.1.1.4320.001266
S1124G1124VgGtgTt11B.1.1.4330.001425
S1124G1124VgGtgTt11B.1.1.4480.002033
S1124G1124VgGtgTt11B.1.1.500.000679
S1124G1124VgGtgTt11B.1.1.510.001718
S1124G1124VgGtgTt11B.1.1.5260.003546
S1124G1124VgGtgTt11B.1.1.610.008772
S1124G1124VgGtgTt11B.1.1.630.000386
S1124G1124VgGtgTt11B.1.1030.019231
S1124G1124VgGtgTt11B.1.1110.001175
S1124G1124VgGtgTt11B.1.1260.001276
S1124G1124VgGtgTt11B.1.1390.000733
S1124G1124VgGtgTt11B.1.1570.002985
S1124G1124VgGtgTt11B.1.160.260.002421
S1124G1124VgGtgTt11B.1.177.160.000664
S1124G1124VgGtgTt11B.1.177.180.00116
S1124G1124VgGtgTt11B.1.177.240.001295
S1124G1124VgGtgTt11B.1.177.320.00135
S1124G1124VgGtgTt11B.1.177.330.001645
S1124G1124VgGtgTt11B.1.177.560.000668
S1124G1124VgGtgTt11B.1.177.570.000281
S1124G1124VgGtgTt11B.1.177.690.001484
S1124G1124VgGtgTt11B.1.177.710.010101
S1124G1124VgGtgTt11B.1.177.80.000752
S1124G1124VgGtgTt11B.1.221.30.000833
S1124G1124VgGtgTt11B.1.2360.002053
S1124G1124VgGtgTt11B.1.2420.018868
S1124G1124VgGtgTt11B.1.258.110.000396
S1124G1124VgGtgTt11B.1.258.140.00098
S1124G1124VgGtgTt11B.1.258.220.002667
S1124G1124VgGtgTt11B.1.2910.019231
S1124G1124VgGtgTt11B.1.3190.003049
S1124G1124VgGtgTt11B.1.3240.001605
S1124G1124VgGtgTt11B.1.3340.018182
S1124G1124VgGtgTt11B.1.3360.002439
S1124G1124VgGtgTt11B.1.3370.005587
S1124G1124VgGtgTt11B.1.3380.008621
S1124G1124VgGtgTt11B.1.3460.001311
S1124G1124VgGtgTt11B.1.3490.000715
S1124G1124VgGtgTt11B.1.3500.002933
S1124G1124VgGtgTt11B.1.36.10.00114
S1124G1124VgGtgTt11B.1.36.160.001425
S1124G1124VgGtgTt11B.1.36.220.001208
S1124G1124VgGtgTt11B.1.36.280.005747
S1124G1124VgGtgTt11B.1.36.310.001751
S1124G1124VgGtgTt11B.1.3610.001289
S1124G1124VgGtgTt11B.1.3960.000706
S1124G1124VgGtgTt11B.1.4020.009804
S1124G1124VgGtgTt11B.1.4040.001302
S1124G1124VgGtgTt11B.1.4090.000781
S1124G1124VgGtgTt11B.1.4150.014286
S1124G1124VgGtgTt11B.1.4160.001269
S1124G1124VgGtgTt11B.1.4220.000812
S1124G1124VgGtgTt11B.1.4510.008197
S1124G1124VgGtgTt11B.1.466.20.000391
S1124G1124VgGtgTt11B.1.4700.001404
S1124G1124VgGtgTt11B.1.4710.002732
S1124G1124VgGtgTt11B.1.4920.007042
S1124G1124VgGtgTt11B.1.4990.00105
S1124G1124VgGtgTt11B.1.5240.001406
S1124G1124VgGtgTt11B.1.5610.000397
S1124G1124VgGtgTt11B.1.5640.000426
S1124G1124VgGtgTt11B.1.564.10.001577
S1124G1124VgGtgTt11B.1.5820.000491
S1124G1124VgGtgTt11B.1.6030.010638
S1124G1124VgGtgTt11B.1.6040.017241
S1124G1124VgGtgTt11B.1.617.30.002985
S1124G1124VgGtgTt11B.1.619.10.000641
S1124G1124VgGtgTt11B.350.007812
S1124G1124VgGtgTt11B.6.60.000889
S1124G1124VgGtgTt11C.160.00106
S1124G1124VgGtgTt11C.350.000774
S1124G1124VgGtgTt11C.390.018868
S1124G1124VgGtgTt11D.30.005917
S1124G1124VgGtgTt11L.10.001905
S1124G1124VgGtgTt11N.50.001767
S1124G1124VgGtgTt11P.1.10.000318
S1124G1124VgGtgTt11P.1.130.000898
S1124G1124VgGtgTt11P.1.40.000977
S1124G1124VgGtgTt11P.1.60.001946
S1124G1124VgGtgTt11P.1.90.004808
S1124G1124VgGtgTt11Q.20.000613
S1124G1124VgGtgTt11Q.30.000145
S1124G1124VgGtgTt11Q.80.000165
S1124G1124VgGtgTt11S.10.00495

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.