CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F55del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S55F55del1delTtc-tc86800.93023321725-21727
S55F55del1delttCtt-8650.058139521725-21727
S55F55del1delTTC-NN8610.011627921725-21727

Details of the mutation F55del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S55F55del1Ttc-tc8086All0.000015
S55F55del1ttCtt-586All0.000001
S55F55del1TTC-NN186All0
S55F55del1Ttc-tc6666B.1.1.70.000059
S55F55del1Ttc-tc33B.1.177.820.001432
S55F55del1Ttc-tc33B.1.3510.000089
S55F55del1ttCtt-22AY.250.000012
S55F55del1ttCtt-22AY.430.000009
S55F55del1Ttc-tc22AY.520.001629
S55F55del1Ttc-tc22B.1.1600.000062
S55F55del1TTC-NN11AY.1000.000046
S55F55del1ttCtt-11AY.470.000031
S55F55del1Ttc-tc11AY.99.20.000092
S55F55del1Ttc-tc11B.1.177.60.000977
S55F55del1Ttc-tc11B.1.36.10.00114
S55F55del1Ttc-tc11R.10.00009