CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F55V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S55F55VnonsynTtcGtc21140.66666721725-21727
S55F55VnonsynTtCGtT2130.14285721725-21727
S55F55VnonsynTtCGtG2120.095238121725-21727
S55F55VnonsynTtCGtA2120.095238121725-21727

Details of the mutation F55V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S55F55VTtcGtc1421All0.000003
S55F55VTtCGtT321All0.000001
S55F55VTtCGtA221All0
S55F55VTtCGtG221All0
S55F55VTtcGtc470.222222
S55F55VTtCGtG270.111111
S55F55VTtCGtT170.055556
S55F55VTtcGtc23AY.440.000012
S55F55VTtCGtT13AY.440.000006
S55F55VTtCGtT13B.10.000009
S55F55VTtcGtc13B.10.000009
S55F55VTtCGtA13B.10.000009
S55F55VTtcGtc12AY.250.000006
S55F55VTtCGtA12AY.250.000006
S55F55VTtcGtc11AY.40.000002
S55F55VTtcGtc11AY.46.60.000072
S55F55VTtcGtc11AY.99.10.001553
S55F55VTtcGtc11B.1.1.250.000569
S55F55VTtcGtc11B.1.4700.001404
S55F55VTtcGtc11B.1.617.20.000004