CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F55S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S55F55SnonsyntTctCc35340.97142921725-21727
S55F55SnonsyntTCtCT3510.028571421725-21727

Details of the mutation F55S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S55F55StTctCc3435All0.000007
S55F55StTCtCT135All0
S55F55StTctCc66AY.40.000009
S55F55StTctCc33AY.250.000018
S55F55StTctCc33AY.430.000013
S55F55StTctCc22AY.30.00002
S55F55StTctCc22AY.90.000135
S55F55StTctCc22B.1.1.70.000002
S55F55StTctCc11A.2.40.003367
S55F55StTctCc11AY.1030.000006
S55F55StTctCc11AY.230.00007
S55F55StTctCc11AY.390.000025
S55F55StTctCc11AY.420.00004
S55F55StTctCc11AY.50.000021
S55F55StTctCc11AY.540.000095
S55F55StTctCc11AY.550.000917
S55F55StTctCc11AY.880.000884
S55F55StTctCc11AY.9.10.000084
S55F55StTctCc11AY.980.000079
S55F55StTctCc11AY.98.10.000048
S55F55StTctCc11B.1.10.000018
S55F55StTctCc11B.1.1770.000013
S55F55StTCtCT11B.1.20.000009
S55F55StTctCc11B.1.3510.00003
S55F55StTctCc11B.1.617.20.000004