CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F541F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S541F541FsynttCttT38273827123183-23185

Details of the mutation F541F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S541F541FttCttT38273827All0.000732
S541F541FttCttT11781178B.1.1.70.001055
S541F541FttCttT343343B.6.60.304889
S541F541FttCttT258258AY.40.000402
S541F541FttCttT180180B.1.5640.076661
S541F541FttCttT154154AY.430.000682
S541F541FttCttT104104B.1.20.000916
S541F541FttCttT9696B.1.617.20.000361
S541F541FttCttT8989AY.120.10.028571
S541F541FttCttT8585B.1.1600.002651
S541F541FttCttT8181B.1.1.3180.024442
S541F541FttCttT6868B.1.1.2340.819277
S541F541FttCttT6060B.10.00055
S541F541FttCttT5959B.1.1.2300.541284
S541F541FttCttT5757AY.1030.000354
S541F541FttCttT5454AY.250.000325
S541F541FttCttT5252B.1.10.000943
S541F541FttCttT5252B.1.1770.000685
S541F541FttCttT4646AY.440.00028
S541F541FttCttT3939P.10.000614
S541F541FttCttT3838AY.9.20.001396
S541F541FttCttT2828AY.46.40.004606
S541F541FttCttT2626A.10.007328
S541F541FttCttT2626AY.39.1.10.018841
S541F541FttCttT2424AY.30.000239
S541F541FttCttT2424AY.980.001896
S541F541FttCttT2020B.1.2400.004311
S541F541FttCttT1818C.80.080357
S541F541FttCttT1717B.1.1.3970.038288
S541F541FttCttT1616B.1.3510.000476
S541F541FttCttT1616B.1.36.290.008277
S541F541FttCttT1414B.1.2210.000994
S541F541FttCttT1313AY.1200.000483
S541F541FttCttT1313AY.470.000404
S541F541FttCttT1313B.1.177.720.044068
S541F541FttCttT1212B.1.3610.015464
S541F541FttCttT1212B.1.4270.000606
S541F541FttCttT1111AY.1020.000292
S541F541FttCttT1111AY.390.000272
S541F541FttCttT1111P.20.002053
S541F541FttCttT1010AY.270.000647
S541F541FttCttT1010B.1.1.1980.014684
S541F541FttCttT1010B.1.1.2140.000555
S541F541FttCttT1010B.1.1.5120.285714
S541F541FttCttT1010B.1.6210.000885
S541F541FttCttT99B.1.4290.000212
S541F541FttCttT88AY.1000.000368
S541F541FttCttT88AY.98.10.000387
S541F541FttCttT88B.1.1.280.00249
S541F541FttCttT88R.10.00072
S541F541FttCttT77AY.1130.000997
S541F541FttCttT77AY.4.20.000152
S541F541FttCttT77B.1.5960.00061
S541F541FttCttT77Q.30.001015
S541F541FttCttT66AY.540.000572
S541F541FttCttT66B.1.1.270.033898
S541F541FttCttT66B.1.36.220.007246
S541F541FttCttT66B.1.3960.004234
S541F541FttCttT55AY.610.000524
S541F541FttCttT55B.1.1.5190.000199
S541F541FttCttT55B.1.177.540.003032
S541F541FttCttT55B.1.2430.000348
S541F541FttCttT55B.1.5950.001305
S541F541FttCttT55C.370.00058
S541F541FttCttT55P.1.10.001588
S541F541FttCttT55P.1.150.001162
S541F541FttCttT55Q.40.002274
S541F541FttCttT44AY.200.000155
S541F541FttCttT44AY.260.000113
S541F541FttCttT44AY.340.000388
S541F541FttCttT44AY.930.001092
S541F541FttCttT44B.1.1.1570.003653
S541F541FttCttT44B.1.1.570.045977
S541F541FttCttT44B.1.177.860.000734
S541F541FttCttT44B.1.258.240.043011
S541F541FttCttT44B.1.6280.001409
S541F541FttCttT44P.1.140.000191
S541F541FttCttT33AY.1180.000188
S541F541FttCttT33AY.1190.000106
S541F541FttCttT33AY.380.001498
S541F541FttCttT33AY.50.000062
S541F541FttCttT33AY.620.001307
S541F541FttCttT33AY.750.000168
S541F541FttCttT33B.1.1.2840.000322
S541F541FttCttT33B.1.1.330.001263
S541F541FttCttT33B.1.1.4340.001046
S541F541FttCttT33B.1.1.540.009063
S541F541FttCttT33B.1.2580.0002
S541F541FttCttT33B.1.360.000438
S541F541FttCttT33B.1.466.20.001174
S541F541FttCttT33B.1.5170.001281
S541F541FttCttT33B.1.5260.000071
S541F541FttCttT33B.1.6370.000219
S541F541FttCttT33C.160.003181
S541F541FttCttT22A0.000774
S541F541FttCttT22A.2.50.000998
S541F541FttCttT22A.300.285714
S541F541FttCttT22AY.1080.002205
S541F541FttCttT22AY.120.000632
S541F541FttCttT22AY.240.000862
S541F541FttCttT22AY.3.10.000171
S541F541FttCttT22AY.330.000134
S541F541FttCttT22AY.360.000296
S541F541FttCttT22AY.420.00008
S541F541FttCttT22AY.560.00321
S541F541FttCttT22AY.670.000929
S541F541FttCttT22AY.7.10.000225
S541F541FttCttT22AY.900.001369
S541F541FttCttT22B0.000256
S541F541FttCttT22B.1.1.2160.001781
S541F541FttCttT22B.1.1.3170.000823
S541F541FttCttT22B.1.1.4090.005666
S541F541FttCttT22B.1.1.5260.007092
S541F541FttCttT22B.1.2320.001075
S541F541FttCttT22B.1.3810.015625
S541F541FttCttT22B.1.3980.005952
S541F541FttCttT22B.1.438.10.000215
S541F541FttCttT22B.1.5820.000981
S541F541FttCttT22B.230.005848
S541F541FttCttT22B.60.00182
S541F541FttCttT22C.360.001821
S541F541FttCttT22P.1.70.000639
S541F541FttCttT22P.30.00319
S541F541FttCttT22Q.80.00033
S541F541FttCttT11AD.20.000219
S541F541FttCttT11AE.50.018519
S541F541FttCttT11AY.1090.00074
S541F541FttCttT11AY.1170.000085
S541F541FttCttT11AY.120.2.10.000498
S541F541FttCttT11AY.1210.000135
S541F541FttCttT11AY.150.002222
S541F541FttCttT11AY.230.00007
S541F541FttCttT11AY.290.000016
S541F541FttCttT11AY.300.000396
S541F541FttCttT11AY.350.000233
S541F541FttCttT11AY.4.2.10.000149
S541F541FttCttT11AY.4.50.000107
S541F541FttCttT11AY.450.000122
S541F541FttCttT11AY.460.000104
S541F541FttCttT11AY.500.000799
S541F541FttCttT11AY.60.000041
S541F541FttCttT11AY.75.10.00018
S541F541FttCttT11AY.850.000427
S541F541FttCttT11AY.880.000884
S541F541FttCttT11AY.90.000068
S541F541FttCttT11AY.99.10.001553
S541F541FttCttT11B.1.1.1480.008772
S541F541FttCttT11B.1.1.1800.010753
S541F541FttCttT11B.1.1.2910.000742
S541F541FttCttT11B.1.1.2940.001266
S541F541FttCttT11B.1.1.3360.016667
S541F541FttCttT11B.1.1.3720.000689
S541F541FttCttT11B.1.1.410.006329
S541F541FttCttT11B.1.1.50.008333
S541F541FttCttT11B.1.160.290.004219
S541F541FttCttT11B.1.160.90.007194
S541F541FttCttT11B.1.177.170.000821
S541F541FttCttT11B.1.177.230.003236
S541F541FttCttT11B.1.177.580.001332
S541F541FttCttT11B.1.177.70.000165
S541F541FttCttT11B.1.177.730.000566
S541F541FttCttT11B.1.177.810.000189
S541F541FttCttT11B.1.177.820.000477
S541F541FttCttT11B.1.177.840.006667
S541F541FttCttT11B.1.2100.002132
S541F541FttCttT11B.1.230.006061
S541F541FttCttT11B.1.2340.000132
S541F541FttCttT11B.1.2380.014925
S541F541FttCttT11B.1.258.170.000104
S541F541FttCttT11B.1.3490.000715
S541F541FttCttT11B.1.351.20.000303
S541F541FttCttT11B.1.36.360.000602
S541F541FttCttT11B.1.36.70.004
S541F541FttCttT11B.1.36.80.001
S541F541FttCttT11B.1.3690.000285
S541F541FttCttT11B.1.3820.008929
S541F541FttCttT11B.1.3970.004854
S541F541FttCttT11B.1.4200.010417
S541F541FttCttT11B.1.4240.008065
S541F541FttCttT11B.1.4260.001009
S541F541FttCttT11B.1.4510.008197
S541F541FttCttT11B.1.4560.003268
S541F541FttCttT11B.1.4990.00105
S541F541FttCttT11B.1.5240.001406
S541F541FttCttT11B.1.5250.000113
S541F541FttCttT11B.1.5400.009709
S541F541FttCttT11B.1.5760.000907
S541F541FttCttT11B.1.5770.000687
S541F541FttCttT11B.1.6120.002653
S541F541FttCttT11B.400.000364
S541F541FttCttT11C.1.20.004255
S541F541FttCttT11C.260.007353
S541F541FttCttT11D.20.000075
S541F541FttCttT11P.1.170.000162